Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AC034159.1-201ENST00000513885 583 ntBASIC2.59□□□□□ -1.99
VAPBO95292 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 CKS1BP7-201ENST00000522230 235 ntBASIC2.59□□□□□ -1.99
VAPBO95292 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 ZNF92P2-201ENST00000600543 1059 ntBASIC2.59□□□□□ -1.99
VAPBO95292 ATP1B3P1-201ENST00000605365 821 ntBASIC2.59□□□□□ -1.99
VAPBO95292 AC007619.2-201ENST00000605743 379 ntBASIC2.59□□□□□ -1.99
VAPBO95292 RPL23AP88-201ENST00000605759 454 ntBASIC2.59□□□□□ -1.99
VAPBO95292 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AC097504.2-201ENST00000608088 454 ntBASIC2.59□□□□□ -1.99
VAPBO95292 AC135507.2-201ENST00000612443 309 ntBASIC2.59□□□□□ -1.99
VAPBO95292 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPBO95292 AC027309.3-201ENST00000623419 351 ntBASIC2.59□□□□□ -1.99
VAPBO95292 CYP3A51P-201ENST00000633513 256 ntBASIC2.59□□□□□ -1.99
VAPBO95292 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.58□□□□□ -2
VAPBO95292 TPTE2P4-201ENST00000258589 1605 ntBASIC2.58□□□□□ -2
VAPBO95292 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
VAPBO95292 OR5J1P-201ENST00000313544 939 ntBASIC2.58□□□□□ -2
VAPBO95292 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.58□□□□□ -2
VAPBO95292 RNU6-1155P-201ENST00000363554 107 ntBASIC2.58□□□□□ -2
VAPBO95292 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.58□□□□□ -2
VAPBO95292 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
VAPBO95292 AP002784.2-201ENST00000397300 549 ntBASIC2.58□□□□□ -2
VAPBO95292 RNU4-27P-201ENST00000410889 139 ntBASIC2.58□□□□□ -2
VAPBO95292 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.58□□□□□ -2
VAPBO95292 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.58□□□□□ -2
VAPBO95292 AL158050.1-201ENST00000416077 457 ntBASIC2.58□□□□□ -2
VAPBO95292 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.58□□□□□ -2
VAPBO95292 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.58□□□□□ -2
VAPBO95292 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.58□□□□□ -2
VAPBO95292 RPL31P54-201ENST00000429803 370 ntBASIC2.58□□□□□ -2
VAPBO95292 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.58□□□□□ -2
VAPBO95292 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.58□□□□□ -2
VAPBO95292 AL050341.1-201ENST00000447743 313 ntBASIC2.58□□□□□ -2
VAPBO95292 RPL23AP20-201ENST00000447965 421 ntBASIC2.58□□□□□ -2
VAPBO95292 RFC5P1-201ENST00000454419 874 ntBASIC2.58□□□□□ -2
VAPBO95292 TPRKBP1-201ENST00000456243 481 ntBASIC2.58□□□□□ -2
VAPBO95292 AC027673.1-201ENST00000456245 405 ntBASIC2.58□□□□□ -2
VAPBO95292 AC104164.3-201ENST00000467363 1258 ntBASIC2.58□□□□□ -2
VAPBO95292 KC877373.1-201ENST00000479066 408 ntBASIC2.58□□□□□ -2
VAPBO95292 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.58□□□□□ -2
VAPBO95292 RPS27P27-201ENST00000498779 255 ntBASIC2.58□□□□□ -2
VAPBO95292 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.58□□□□□ -2
VAPBO95292 VN1R104P-201ENST00000505115 1009 ntBASIC2.58□□□□□ -2
VAPBO95292 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
VAPBO95292 RNA5SP282-201ENST00000516355 108 ntBASIC2.58□□□□□ -2
VAPBO95292 RNA5SP135-201ENST00000517019 125 ntBASIC2.58□□□□□ -2
VAPBO95292 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.58□□□□□ -2
VAPBO95292 AC128657.1-201ENST00000549459 145 ntBASIC2.58□□□□□ -2
VAPBO95292 AC090695.1-201ENST00000561269 1222 ntBASIC2.58□□□□□ -2
VAPBO95292 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
VAPBO95292 LINC00557-201ENST00000563184 1279 ntBASIC2.58□□□□□ -2
VAPBO95292 MTCO1P40-201ENST00000574371 625 ntBASIC2.58□□□□□ -2
VAPBO95292 VN1R90P-201ENST00000595717 726 ntBASIC2.58□□□□□ -2
VAPBO95292 AC008739.2-201ENST00000597006 317 ntBASIC2.58□□□□□ -2
VAPBO95292 AC010620.2-201ENST00000600135 313 ntBASIC2.58□□□□□ -2
VAPBO95292 AC133794.1-201ENST00000602731 914 ntBASIC2.58□□□□□ -2
VAPBO95292 AC005000.2-201ENST00000605468 310 ntBASIC2.58□□□□□ -2
VAPBO95292 AL161629.2-201ENST00000615347 275 ntBASIC2.58□□□□□ -2
VAPBO95292 AL356585.4-201ENST00000623078 1229 ntBASIC2.58□□□□□ -2
VAPBO95292 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
VAPBO95292 AC110079.1-202ENST00000635213 138 ntBASIC2.58□□□□□ -2
VAPBO95292 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VAPBO95292 AC008568.2-201ENST00000623862 2313 ntBASIC2.58□□□□□ -2
VAPBO95292 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
VAPBO95292 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VAPBO95292 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VAPBO95292 AC026241.1-201ENST00000517873 2142 ntBASIC2.57□□□□□ -2
VAPBO95292 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
VAPBO95292 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
VAPBO95292 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VAPBO95292 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VAPBO95292 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
VAPBO95292 AL672167.1-206ENST00000356293 943 ntBASIC2.57□□□□□ -2
VAPBO95292 SNORD62.1-201ENST00000362541 86 ntBASIC2.57□□□□□ -2
VAPBO95292 RNU6-582P-201ENST00000362989 107 ntBASIC2.57□□□□□ -2
VAPBO95292 RNU6-1180P-201ENST00000364935 107 ntBASIC2.57□□□□□ -2
VAPBO95292 OR1L1-202ENST00000373686 1083 ntBASIC2.57□□□□□ -2
VAPBO95292 RNU6-481P-201ENST00000384194 107 ntBASIC2.57□□□□□ -2
VAPBO95292 RNU6-882P-201ENST00000391025 103 ntBASIC2.57□□□□□ -2
VAPBO95292 FCF1P2-201ENST00000415284 583 ntBASIC2.57□□□□□ -2
VAPBO95292 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.57□□□□□ -2
VAPBO95292 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
VAPBO95292 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.57□□□□□ -2
VAPBO95292 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.57□□□□□ -2
VAPBO95292 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.57□□□□□ -2
VAPBO95292 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.57□□□□□ -2
VAPBO95292 MTCO1P48-201ENST00000448024 1096 ntBASIC2.57□□□□□ -2
VAPBO95292 Z82190.1-201ENST00000454534 490 ntBASIC2.57□□□□□ -2
VAPBO95292 SNORD109B-201ENST00000458961 67 ntBASIC2.57□□□□□ -2
VAPBO95292 SNORD109A-201ENST00000459128 67 ntBASIC2.57□□□□□ -2
VAPBO95292 AC126182.1-201ENST00000478134 357 ntBASIC2.57□□□□□ -2
VAPBO95292 RPS3AP14-201ENST00000483907 780 ntBASIC2.57□□□□□ -2
VAPBO95292 SEM1P1-201ENST00000506694 209 ntBASIC2.57□□□□□ -2
VAPBO95292 AC026801.2-201ENST00000515352 425 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms