Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC087752.4-201ENST00000605911 462 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CACNA1FO60840 CR381653.2-201ENST00000624041 768 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 CR392039.4-201ENST00000624968 501 ntBASIC3.54□□□□□ -1.84
CACNA1FO60840 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CACNA1FO60840 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CACNA1FO60840 RNU6-7-201ENST00000364784 107 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 RNU6-8-201ENST00000365467 107 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 RNU6-98P-201ENST00000384173 107 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 AL590084.2-201ENST00000401481 382 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CACNA1FO60840 MTCO3P41-201ENST00000414801 328 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.53□□□□□ -1.84
CACNA1FO60840 AC048351.1-201ENST00000420064 602 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 MTCYBP39-201ENST00000437562 491 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.53□□□□□ -1.84
CACNA1FO60840 AL050341.1-201ENST00000447743 313 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.53□□□□□ -1.84
CACNA1FO60840 AF213884.2-201ENST00000510417 903 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 SCGB1D5P-201ENST00000515134 247 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.53□□□□□ -1.84
CACNA1FO60840 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.53□□□□□ -1.84
CACNA1FO60840 ELOCP29-201ENST00000588193 334 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 AP005901.5-201ENST00000545779 1796 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 SEC63P2-201ENST00000503863 1939 ntBASIC3.53□□□□□ -1.84
CACNA1FO60840 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CACNA1FO60840 ENSAP3-201ENST00000312710 333 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 OR1L1-202ENST00000373686 1083 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 RNU6-1215P-201ENST00000384441 102 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL138827.1-201ENST00000402666 306 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 MTCO1P3-201ENST00000429327 192 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 RPL21P41-201ENST00000459863 264 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL024509.2-201ENST00000493462 493 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL391156.1-201ENST00000554965 554 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AGGF1P4-201ENST00000568249 801 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 MIR4999-201ENST00000585029 91 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC073648.5-201ENST00000603502 305 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 FRG1HP-204ENST00000617940 757 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL590240.3-201ENST00000621416 943 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 MIR6852-201ENST00000621699 66 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1FO60840 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CACNA1FO60840 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1FO60840 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1FO60840 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1FO60840 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC011155.1-201ENST00000316512 456 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 SNORA70E-201ENST00000384492 135 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL031679.1-201ENST00000400616 525 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AC105402.1-201ENST00000413336 545 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.52□□□□□ -1.85
CACNA1FO60840 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.52□□□□□ -1.85
CACNA1FO60840 MTND3P1-201ENST00000441336 220 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AL929288.2-201ENST00000446368 407 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.52□□□□□ -1.85
CACNA1FO60840 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC078817.1-201ENST00000492623 435 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 MTATP6P22-201ENST00000507369 598 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC083923.1-201ENST00000523708 376 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AC124293.1-201ENST00000530034 493 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.52□□□□□ -1.85
CACNA1FO60840 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC080078.2-201ENST00000603766 501 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AL160394.1-201ENST00000624765 724 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.52□□□□□ -1.85
CACNA1FO60840 AC092593.1-201ENST00000515413 1815 ntBASIC3.52□□□□□ -1.85
CACNA1FO60840 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CACNA1FO60840 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.52□□□□□ -1.85
CACNA1FO60840 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CACNA1FO60840 Y_RNA.201-201ENST00000364052 96 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 U3.12-201ENST00000364498 214 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 RNU4-75P-201ENST00000364621 146 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.51□□□□□ -1.85
CACNA1FO60840 RNU6-244P-201ENST00000391028 104 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.51□□□□□ -1.85
CACNA1FO60840 YPEL5P1-201ENST00000419731 367 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 COTL1P1-201ENST00000422309 375 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.51□□□□□ -1.85
CACNA1FO60840 RPS24P8-201ENST00000431490 402 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.51□□□□□ -1.85
CACNA1FO60840 MTND1P30-201ENST00000441241 901 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.51□□□□□ -1.85
CACNA1FO60840 MTND1P1-201ENST00000445453 368 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.51□□□□□ -1.85
CACNA1FO60840 AL109933.2-201ENST00000452651 260 ntBASIC3.51□□□□□ -1.85
CACNA1FO60840 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms