Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RPL7P5-201ENST00000471472 736 ntBASIC1.71□□□□□ -2.13
URB1O60287 ARL4AP2-201ENST00000507378 601 ntBASIC1.71□□□□□ -2.13
URB1O60287 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.71□□□□□ -2.13
URB1O60287 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.71□□□□□ -2.13
URB1O60287 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.13
URB1O60287 MIR6779-201ENST00000617283 64 ntBASIC1.71□□□□□ -2.13
URB1O60287 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
URB1O60287 RNY1-201ENST00000364228 113 ntBASIC1.71□□□□□ -2.14
URB1O60287 RNA5SP160-201ENST00000364866 120 ntBASIC1.71□□□□□ -2.14
URB1O60287 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
URB1O60287 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.71□□□□□ -2.14
URB1O60287 AC009237.2-201ENST00000421358 284 ntBASIC1.71□□□□□ -2.14
URB1O60287 UBE2V2P1-201ENST00000434717 398 ntBASIC1.71□□□□□ -2.14
URB1O60287 HMGB1P31-201ENST00000437242 427 ntBASIC1.71□□□□□ -2.14
URB1O60287 CBWD4P-201ENST00000445695 655 ntBASIC1.71□□□□□ -2.14
URB1O60287 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.71□□□□□ -2.14
URB1O60287 RPS4XP11-201ENST00000446897 772 ntBASIC1.71□□□□□ -2.14
URB1O60287 AC009961.3-201ENST00000449832 765 ntBASIC1.71□□□□□ -2.14
URB1O60287 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.71□□□□□ -2.14
URB1O60287 AC104472.2-201ENST00000469035 601 ntBASIC1.71□□□□□ -2.14
URB1O60287 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.71□□□□□ -2.14
URB1O60287 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.71□□□□□ -2.14
URB1O60287 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
URB1O60287 AC233981.2-201ENST00000611524 1614 ntBASIC1.71□□□□□ -2.14
URB1O60287 MIR92A2-201ENST00000385299 75 ntBASIC1.7□□□□□ -2.14
URB1O60287 MIR1294-201ENST00000408503 142 ntBASIC1.7□□□□□ -2.14
URB1O60287 AC004965.1-201ENST00000413033 213 ntBASIC1.7□□□□□ -2.14
URB1O60287 MTCO3P30-201ENST00000426425 670 ntBASIC1.7□□□□□ -2.14
URB1O60287 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.7□□□□□ -2.14
URB1O60287 RN7SKP40-201ENST00000517211 242 ntBASIC1.7□□□□□ -2.14
URB1O60287 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.7□□□□□ -2.14
URB1O60287 AC011604.1-201ENST00000545978 196 ntBASIC1.7□□□□□ -2.14
URB1O60287 RPS3AP23-202ENST00000574601 686 ntBASIC1.7□□□□□ -2.14
URB1O60287 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
URB1O60287 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 AC019159.1-201ENST00000605094 187 ntBASIC1.7□□□□□ -2.14
URB1O60287 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
URB1O60287 AL359740.1-201ENST00000624340 592 ntBASIC1.7□□□□□ -2.14
URB1O60287 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 ZNF720P1-201ENST00000562403 1939 ntBASIC1.7□□□□□ -2.14
URB1O60287 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
URB1O60287 Y_RNA.327-201ENST00000365201 102 ntBASIC1.7□□□□□ -2.14
URB1O60287 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.7□□□□□ -2.14
URB1O60287 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
URB1O60287 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.7□□□□□ -2.14
URB1O60287 HSPE1P28-201ENST00000443139 211 ntBASIC1.7□□□□□ -2.14
URB1O60287 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.7□□□□□ -2.14
URB1O60287 AC109471.1-201ENST00000511631 612 ntBASIC1.7□□□□□ -2.14
URB1O60287 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 MIR449C-201ENST00000516047 92 ntBASIC1.7□□□□□ -2.14
URB1O60287 SMARCE1P4-201ENST00000523647 241 ntBASIC1.7□□□□□ -2.14
URB1O60287 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 MYL12BP1-201ENST00000569826 507 ntBASIC1.7□□□□□ -2.14
URB1O60287 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.7□□□□□ -2.14
URB1O60287 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.7□□□□□ -2.14
URB1O60287 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.7□□□□□ -2.14
URB1O60287 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
URB1O60287 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.7□□□□□ -2.14
URB1O60287 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.69□□□□□ -2.14
URB1O60287 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
URB1O60287 U8.9-201ENST00000365667 134 ntBASIC1.69□□□□□ -2.14
URB1O60287 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.69□□□□□ -2.14
URB1O60287 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.69□□□□□ -2.14
URB1O60287 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.69□□□□□ -2.14
URB1O60287 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.69□□□□□ -2.14
URB1O60287 SSXP1-201ENST00000453640 473 ntBASIC1.69□□□□□ -2.14
URB1O60287 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
URB1O60287 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
URB1O60287 RN7SKP5-201ENST00000517045 272 ntBASIC1.69□□□□□ -2.14
URB1O60287 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.69□□□□□ -2.14
URB1O60287 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.69□□□□□ -2.14
URB1O60287 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.69□□□□□ -2.14
URB1O60287 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
URB1O60287 AL118496.1-201ENST00000440201 1812 ntBASIC1.69□□□□□ -2.14
URB1O60287 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
URB1O60287 Y_RNA.354-201ENST00000365448 111 ntBASIC1.69□□□□□ -2.14
URB1O60287 RNU1-101P-201ENST00000391171 127 ntBASIC1.69□□□□□ -2.14
URB1O60287 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
URB1O60287 FNDC3CP-201ENST00000420795 1155 ntBASIC1.69□□□□□ -2.14
URB1O60287 RPL21P2-201ENST00000440049 481 ntBASIC1.69□□□□□ -2.14
URB1O60287 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
URB1O60287 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.69□□□□□ -2.14
URB1O60287 AC078918.1-201ENST00000498515 228 ntBASIC1.69□□□□□ -2.14
URB1O60287 AC135279.1-201ENST00000543493 504 ntBASIC1.69□□□□□ -2.14
URB1O60287 DUXAP3-201ENST00000603616 594 ntBASIC1.69□□□□□ -2.14
URB1O60287 AL512598.1-201ENST00000610158 273 ntBASIC1.69□□□□□ -2.14
URB1O60287 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
URB1O60287 CCNB2P1-201ENST00000399411 1150 ntBASIC1.68□□□□□ -2.14
URB1O60287 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.68□□□□□ -2.14
URB1O60287 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.68□□□□□ -2.14
URB1O60287 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.68□□□□□ -2.14
URB1O60287 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.68□□□□□ -2.14
URB1O60287 RPL39P40-201ENST00000445481 146 ntBASIC1.68□□□□□ -2.14
URB1O60287 RPL21P134-201ENST00000453468 483 ntBASIC1.68□□□□□ -2.14
URB1O60287 AC089999.1-201ENST00000460336 374 ntBASIC1.68□□□□□ -2.14
URB1O60287 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
URB1O60287 GTF2IP9-201ENST00000502460 301 ntBASIC1.68□□□□□ -2.14
URB1O60287 AC008526.1-201ENST00000509149 338 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms