Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHMP2AO43633 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AC091564.4-201ENST00000533934 2194 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 RNU5D-1-201ENST00000363299 116 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AL589880.1-201ENST00000448271 287 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 NDUFA5P7-201ENST00000452914 242 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 RPL21P18-201ENST00000469899 480 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 RPL23AP11-201ENST00000475260 469 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 RPL23AP94-201ENST00000512518 302 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP2AO43633 RNA5SP320-201ENST00000516263 124 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 UBTFL10-201ENST00000528532 562 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC124293.1-201ENST00000530034 493 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 ZNF705CP-201ENST00000530515 889 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 EEF1B2P4-201ENST00000551398 348 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC027176.1-201ENST00000560204 514 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AC245036.5-201ENST00000596330 847 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AL671309.1-201ENST00000603750 544 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 VN1R9P-201ENST00000614184 867 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC091925.2-201ENST00000625059 256 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 AC090740.1-201ENST00000623193 2262 ntBASIC2.87□□□□□ -1.95
CHMP2AO43633 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP2AO43633 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHMP2AO43633 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHMP2AO43633 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
CHMP2AO43633 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP2AO43633 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.86□□□□□ -1.95
CHMP2AO43633 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP2AO43633 FAM35BP-202ENST00000497389 3337 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 AL672167.1-206ENST00000356293 943 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 SNORA1.3-201ENST00000384676 136 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 MTCO2P1-201ENST00000424648 477 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.86□□□□□ -1.95
CHMP2AO43633 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CHMP2AO43633 Z96811.1-201ENST00000445880 108 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.86□□□□□ -1.95
CHMP2AO43633 KC877373.1-201ENST00000479066 408 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CHMP2AO43633 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 AC084035.1-201ENST00000634543 607 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 IGHVIII-44-202ENST00000636235 289 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.86□□□□□ -1.95
CHMP2AO43633 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP2AO43633 AL513185.3-201ENST00000433335 1300 ntBASIC2.86□□□□□ -1.95
CHMP2AO43633 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP2AO43633 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CHMP2AO43633 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP2AO43633 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 TMEM167AP1-201ENST00000423409 219 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 RPL23AP16-201ENST00000441715 421 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 GXYLT1P1-201ENST00000446657 490 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AL353718.1-201ENST00000451028 517 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC006390.1-201ENST00000508068 283 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 RN7SKP24-201ENST00000515888 284 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP2AO43633 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.85□□□□□ -1.95
CHMP2AO43633 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AL021368.1-201ENST00000607490 540 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC007275.1-201ENST00000621243 671 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AC097460.3-201ENST00000623099 442 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 AC243829.7-201ENST00000633081 225 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP2AO43633 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.85□□□□□ -1.95
CHMP2AO43633 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CHMP2AO43633 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP2AO43633 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP2AO43633 AC080100.1-201ENST00000624239 5356 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHMP2AO43633 MIR16-2-201ENST00000362117 81 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AL121978.1-201ENST00000402778 359 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms