Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM1O15116 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
LSM1O15116 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM1O15116 RN7SKP27-201ENST00000410684 333 ntBASIC2.8□□□□□ -1.96
LSM1O15116 RPS3AP25-201ENST00000411660 793 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AL592310.1-201ENST00000414330 671 ntBASIC2.8□□□□□ -1.96
LSM1O15116 MTATP6P11-201ENST00000428071 670 ntBASIC2.8□□□□□ -1.96
LSM1O15116 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM1O15116 VN1R10P-201ENST00000447106 875 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC112492.1-201ENST00000449607 712 ntBASIC2.8□□□□□ -1.96
LSM1O15116 PRSS3P4-201ENST00000453323 162 ntBASIC2.8□□□□□ -1.96
LSM1O15116 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM1O15116 AC244505.3-201ENST00000454598 187 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC073901.1-201ENST00000462471 408 ntBASIC2.8□□□□□ -1.96
LSM1O15116 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM1O15116 AC006445.1-201ENST00000491925 405 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC093801.2-201ENST00000503966 1050 ntBASIC2.8□□□□□ -1.96
LSM1O15116 COX7A2P2-201ENST00000505291 250 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC109464.2-201ENST00000510242 943 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM1O15116 RN7SKP272-201ENST00000516988 232 ntBASIC2.8□□□□□ -1.96
LSM1O15116 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.8□□□□□ -1.96
LSM1O15116 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
LSM1O15116 CR383656.7-201ENST00000548164 174 ntBASIC2.8□□□□□ -1.96
LSM1O15116 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.8□□□□□ -1.96
LSM1O15116 AC122134.1-202ENST00000569111 1201 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC015688.2-201ENST00000584523 262 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.8□□□□□ -1.96
LSM1O15116 AC097504.2-201ENST00000608088 454 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC253576.2-201ENST00000618815 580 ntBASIC2.8□□□□□ -1.96
LSM1O15116 AC009039.2-201ENST00000624524 529 ntBASIC2.8□□□□□ -1.96
LSM1O15116 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LSM1O15116 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LSM1O15116 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM1O15116 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM1O15116 RNU6-707P-201ENST00000364647 95 ntBASIC2.79□□□□□ -1.96
LSM1O15116 RNVU1-14-201ENST00000384770 164 ntBASIC2.79□□□□□ -1.96
LSM1O15116 MIR181A2-201ENST00000384863 110 ntBASIC2.79□□□□□ -1.96
LSM1O15116 RNU6-1300P-201ENST00000391046 108 ntBASIC2.79□□□□□ -1.96
LSM1O15116 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LSM1O15116 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL356320.2-201ENST00000417263 507 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM1O15116 BEND7P1-201ENST00000422058 457 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM1O15116 AC129850.1-201ENST00000436203 508 ntBASIC2.79□□□□□ -1.96
LSM1O15116 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM1O15116 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM1O15116 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM1O15116 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM1O15116 RPL37P4-201ENST00000448908 268 ntBASIC2.79□□□□□ -1.96
LSM1O15116 SNRPGP6-201ENST00000451124 220 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL353691.1-201ENST00000451332 387 ntBASIC2.79□□□□□ -1.96
LSM1O15116 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM1O15116 AC234775.1-201ENST00000454247 670 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL109741.2-201ENST00000455561 343 ntBASIC2.79□□□□□ -1.96
LSM1O15116 SUMO2P2-201ENST00000456482 255 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
LSM1O15116 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.79□□□□□ -1.96
LSM1O15116 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LSM1O15116 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.79□□□□□ -1.96
LSM1O15116 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.79□□□□□ -1.96
LSM1O15116 AC008628.1-201ENST00000508663 265 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AC006445.2-201ENST00000510061 472 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM1O15116 AP000867.2-201ENST00000532468 320 ntBASIC2.79□□□□□ -1.96
LSM1O15116 OR7K1P-201ENST00000546439 926 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.79□□□□□ -1.96
LSM1O15116 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
LSM1O15116 U73023.1-201ENST00000603134 700 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AC013444.2-201ENST00000603317 787 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL592148.2-201ENST00000612210 372 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AL355493.4-201ENST00000618530 292 ntBASIC2.79□□□□□ -1.96
LSM1O15116 AC091953.5-201ENST00000622919 233 ntBASIC2.79□□□□□ -1.96
LSM1O15116 OR8B1P-202ENST00000641132 1178 ntBASIC2.79□□□□□ -1.96
LSM1O15116 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LSM1O15116 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LSM1O15116 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM1O15116 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM1O15116 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM1O15116 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM1O15116 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM1O15116 RPL9P7-201ENST00000330965 580 ntBASIC2.78□□□□□ -1.96
LSM1O15116 DEFB108F-201ENST00000344638 222 ntBASIC2.78□□□□□ -1.96
LSM1O15116 SNORA71.3-201ENST00000362582 128 ntBASIC2.78□□□□□ -1.96
LSM1O15116 SNORA71.1-201ENST00000364523 117 ntBASIC2.78□□□□□ -1.96
LSM1O15116 SNORA9.2-201ENST00000365361 133 ntBASIC2.78□□□□□ -1.96
LSM1O15116 MIR34B-201ENST00000385076 84 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AL355615.1-201ENST00000406187 641 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
LSM1O15116 AC007742.1-201ENST00000425789 329 ntBASIC2.78□□□□□ -1.96
LSM1O15116 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC024082.2-201ENST00000434771 238 ntBASIC2.78□□□□□ -1.96
LSM1O15116 ELOCP26-201ENST00000436067 329 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC092393.1-201ENST00000439625 742 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM1O15116 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM1O15116 AP001992.1-205ENST00000462248 379 ntBASIC2.78□□□□□ -1.96
LSM1O15116 AC092757.1-201ENST00000467293 467 ntBASIC2.78□□□□□ -1.96
LSM1O15116 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms