Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 RNA5SP397-201ENST00000391323 118 ntBASIC5.33□□□□□ -1.56
SOX1O00570 RNU6-516P-201ENST00000411381 104 ntBASIC5.33□□□□□ -1.56
SOX1O00570 BX682237.1-201ENST00000415016 335 ntBASIC5.33□□□□□ -1.56
SOX1O00570 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX1O00570 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX1O00570 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX1O00570 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.33□□□□□ -1.56
SOX1O00570 RPS17P13-201ENST00000448974 407 ntBASIC5.33□□□□□ -1.56
SOX1O00570 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX1O00570 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX1O00570 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SOX1O00570 RPL12P39-201ENST00000455456 496 ntBASIC5.33□□□□□ -1.56
SOX1O00570 RPL23AP55-201ENST00000498163 452 ntBASIC5.33□□□□□ -1.56
SOX1O00570 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.33□□□□□ -1.56
SOX1O00570 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.33□□□□□ -1.56
SOX1O00570 RNA5SP392-201ENST00000516905 112 ntBASIC5.33□□□□□ -1.56
SOX1O00570 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 AC113195.1-201ENST00000579952 141 ntBASIC5.33□□□□□ -1.56
SOX1O00570 AC025588.3-201ENST00000604182 274 ntBASIC5.33□□□□□ -1.56
SOX1O00570 AC100812.1-201ENST00000607622 580 ntBASIC5.33□□□□□ -1.56
SOX1O00570 BX005214.3-202ENST00000619809 325 ntBASIC5.33□□□□□ -1.56
SOX1O00570 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SOX1O00570 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SOX1O00570 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SOX1O00570 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.32□□□□□ -1.56
SOX1O00570 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SOX1O00570 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SOX1O00570 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX1O00570 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SOX1O00570 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SOX1O00570 Y_RNA.153-201ENST00000363615 91 ntBASIC5.32□□□□□ -1.56
SOX1O00570 RNU6-128P-201ENST00000383976 107 ntBASIC5.32□□□□□ -1.56
SOX1O00570 RNU6-432P-201ENST00000384196 109 ntBASIC5.32□□□□□ -1.56
SOX1O00570 RPS26P8-201ENST00000393490 348 ntBASIC5.32□□□□□ -1.56
SOX1O00570 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 RNU2-21P-201ENST00000410368 188 ntBASIC5.32□□□□□ -1.56
SOX1O00570 RNU6-1050P-201ENST00000410388 107 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX1O00570 AC080125.1-201ENST00000414888 684 ntBASIC5.32□□□□□ -1.56
SOX1O00570 DPH3P2-201ENST00000422618 250 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC008267.5-201ENST00000424928 265 ntBASIC5.32□□□□□ -1.56
SOX1O00570 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX1O00570 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX1O00570 PPIAP3-201ENST00000450588 505 ntBASIC5.32□□□□□ -1.56
SOX1O00570 HMGB3P21-201ENST00000452483 547 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC092451.1-201ENST00000480211 153 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC135721.1-201ENST00000497954 479 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC116655.1-201ENST00000508324 901 ntBASIC5.32□□□□□ -1.56
SOX1O00570 RNU6-470P-201ENST00000515954 104 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX1O00570 RANP3-201ENST00000530970 276 ntBASIC5.32□□□□□ -1.56
SOX1O00570 GNAI2P1-201ENST00000541815 315 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.32□□□□□ -1.56
SOX1O00570 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX1O00570 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX1O00570 AL121576.1-201ENST00000556055 276 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.32□□□□□ -1.56
SOX1O00570 AL109918.3-201ENST00000603072 338 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AC009229.3-201ENST00000608056 282 ntBASIC5.32□□□□□ -1.56
SOX1O00570 U2.17-201ENST00000611454 95 ntBASIC5.32□□□□□ -1.56
SOX1O00570 AL732372.2-225ENST00000642124 456 ntBASIC5.32□□□□□ -1.56
SOX1O00570 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX1O00570 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX1O00570 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.32□□□□□ -1.56
SOX1O00570 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SOX1O00570 CDC27P3-201ENST00000635418 1910 ntBASIC5.32□□□□□ -1.56
SOX1O00570 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.32□□□□□ -1.56
SOX1O00570 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SOX1O00570 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX1O00570 AC011755.1-201ENST00000623763 2049 ntBASIC5.31□□□□□ -1.56
SOX1O00570 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX1O00570 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SOX1O00570 AL158163.1-201ENST00000603915 1649 ntBASIC5.31□□□□□ -1.56
SOX1O00570 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX1O00570 RNVU1-3-201ENST00000364313 161 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RNU6-99P-201ENST00000364721 107 ntBASIC5.31□□□□□ -1.56
SOX1O00570 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SOX1O00570 SNORA9-201ENST00000384215 133 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.31□□□□□ -1.56
SOX1O00570 E2F6P2-201ENST00000420708 748 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SOX1O00570 RPL7AP25-201ENST00000423357 805 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AL132765.1-201ENST00000434165 553 ntBASIC5.31□□□□□ -1.56
SOX1O00570 RPL21P112-201ENST00000434403 463 ntBASIC5.31□□□□□ -1.56
SOX1O00570 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms