Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGN4O00479 RPAP2P1-201ENST00000603626 1168 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGN4O00479 AC112503.2-201ENST00000609005 552 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AC087241.4-201ENST00000612441 480 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AC015726.3-201ENST00000624501 418 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HMGN4O00479 ZNF90P1-201ENST00000480493 1951 ntBASIC1.67□□□□□ -2.14
HMGN4O00479 AC093536.2-201ENST00000565257 1406 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC026241.1-201ENST00000517873 2142 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC099654.7-201ENST00000635788 2127 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGN4O00479 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGN4O00479 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN4O00479 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGN4O00479 AL513477.1-202ENST00000417061 214 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 UBE2V1P6-201ENST00000430840 422 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 RPS7P2-201ENST00000435134 607 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 TPT1P14-201ENST00000448018 505 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 HMGB1P15-201ENST00000453854 435 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN4O00479 AC090453.1-201ENST00000495560 436 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 RPS29P21-201ENST00000496272 170 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 MTND3P24-201ENST00000506306 329 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGN4O00479 AC024224.1-201ENST00000538284 609 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN4O00479 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGN4O00479 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC245036.5-201ENST00000596330 847 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGN4O00479 FAM157B-203ENST00000639350 358 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGN4O00479 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGN4O00479 HSPA8P4-201ENST00000511877 1920 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 AC135776.4-201ENST00000624300 1904 ntBASIC1.66□□□□□ -2.14
HMGN4O00479 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.65□□□□□ -2.14
HMGN4O00479 RNU6-629P-201ENST00000384061 103 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 MIR1294-201ENST00000408503 142 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 RNU2-21P-201ENST00000410368 188 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 RNA5SP38-201ENST00000410750 119 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGN4O00479 AL137014.1-201ENST00000420490 1226 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 OR51AB1P-201ENST00000429046 620 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 BX276092.4-201ENST00000452056 248 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 AL035407.2-201ENST00000454090 378 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGN4O00479 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGN4O00479 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGN4O00479 AC090515.1-201ENST00000465295 476 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGN4O00479 RPS23P3-201ENST00000470993 430 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
HMGN4O00479 AC017007.3-201ENST00000479865 435 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 RNU1-104P-201ENST00000517280 175 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGN4O00479 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGN4O00479 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGN4O00479 MTND4LP24-201ENST00000572277 291 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGN4O00479 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGN4O00479 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGN4O00479 NUTF2P8-201ENST00000604593 363 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 AC098657.3-201ENST00000620434 263 ntBASIC1.65□□□□□ -2.15
HMGN4O00479 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGN4O00479 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGN4O00479 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
HMGN4O00479 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMGN4O00479 RNU6-666P-201ENST00000363499 107 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 RNU4-26P-201ENST00000410270 107 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 RPS15AP40-201ENST00000419621 391 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 MTCYBP29-201ENST00000436327 1006 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 RABEPKP1-201ENST00000440529 1026 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGN4O00479 NAMPTP2-201ENST00000505629 1115 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGN4O00479 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGN4O00479 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGN4O00479 NOP56P3-201ENST00000549457 385 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGN4O00479 PCNAP1-202ENST00000595299 752 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.64□□□□□ -2.15
HMGN4O00479 AC012213.4-201ENST00000606457 354 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 AC103710.2-201ENST00000609912 942 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGN4O00479 RMST_5.1-201ENST00000618704 126 ntBASIC1.64□□□□□ -2.15
HMGN4O00479 ZNF734P-201ENST00000419494 1534 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms