Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC233702.1-201ENST00000482905 502 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC021382.1-201ENST00000483523 359 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 RPL21P131-201ENST00000497298 483 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 RNU6-150P-201ENST00000516237 95 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AP003497.1-201ENST00000528472 562 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 YWHAZP1-201ENST00000556286 722 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 MIR4506-201ENST00000584693 77 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AL137843.1-201ENST00000605078 385 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC084035.1-201ENST00000634543 607 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 MIR6830-201ENST00000636015 70 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AC244258.1-201ENST00000637553 1071 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AL392088.2-201ENST00000637607 285 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AL161431.1-201ENST00000618966 4205 ntBASIC2.32□□□□□ -2.04
SMKR1H3BMG3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 SNORD56.5-201ENST00000364281 72 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 RPL23AP29-201ENST00000397284 453 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 RPL7P10-201ENST00000417407 739 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 OR2AS1P-201ENST00000427827 319 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 NANOGP2-201ENST00000435391 727 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 Z82210.1-201ENST00000440037 231 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AL049734.2-201ENST00000441066 616 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 BNIP3P2-201ENST00000441221 577 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 PIGFP3-201ENST00000441918 722 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 WASF1P1-201ENST00000447560 1131 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 MTND1P31-201ENST00000449206 961 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 ZNF886P-201ENST00000450781 723 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AC087588.1-201ENST00000462203 316 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AP004217.1-201ENST00000480579 346 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 FCF1P8-201ENST00000510322 597 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 OR5BM1P-201ENST00000512021 366 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 IGKV2-26-201ENST00000518305 343 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 HSPE1P20-201ENST00000538133 289 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 CR383656.6-201ENST00000550518 394 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AL355836.1-201ENST00000555951 870 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 PARP1P2-201ENST00000556806 195 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 TRAV28-201ENST00000557548 323 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AC010546.1-201ENST00000569391 485 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 MIR5685-201ENST00000579080 79 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AC006504.3-201ENST00000586818 523 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 BNIP3P27-201ENST00000599991 412 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AL161729.4-201ENST00000604650 476 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AC093838.1-201ENST00000613014 469 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 UCA1.1-201ENST00000620952 75 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AC009268.2-201ENST00000621925 457 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AC004808.1-201ENST00000627671 721 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 AP003399.1-201ENST00000637534 361 ntBASIC2.31□□□□□ -2.04
SMKR1H3BMG3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMKR1H3BMG3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RNU4-35P-201ENST00000362588 141 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RNU6-621P-201ENST00000364752 109 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 Y_RNA.311-201ENST00000365068 96 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RNU6-741P-201ENST00000383889 107 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MIR767-201ENST00000390228 109 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 SNORD17-201ENST00000390930 237 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P75-201ENST00000396599 483 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P28-201ENST00000401418 483 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AL356421.1-201ENST00000403255 413 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AL592114.1-201ENST00000403842 483 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MIR1284-201ENST00000408337 120 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RNA5SP492-201ENST00000411330 114 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL36AP36-201ENST00000418616 301 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AL953862.1-201ENST00000423016 168 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 ATP5JP1-201ENST00000431631 322 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MTCO1P53-201ENST00000441633 699 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms