Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 CBX3P1-201ENST00000325243 554 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-960P-201ENST00000364056 120 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-335P-201ENST00000364563 113 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RNU1-64P-201ENST00000365443 163 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-332P-201ENST00000391193 108 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA48.7-201ENST00000391302 135 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 Z98745.1-201ENST00000402553 494 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AL136116.1-201ENST00000403591 381 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AL359634.1-202ENST00000404721 284 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 NDUFS5P1-201ENST00000405668 289 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RNA5SP118-201ENST00000410385 109 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 SNRPFP1-201ENST00000414761 252 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RPS23P10-201ENST00000416185 486 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RPL7L1P8-201ENST00000469911 741 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC010285.1-201ENST00000470580 392 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 ENPP7P11-201ENST00000505915 627 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-875P-201ENST00000516488 106 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 SUMO2P20-201ENST00000520803 283 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 ADI1P3-201ENST00000549509 470 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC105129.1-201ENST00000560250 297 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 MIR3138-201ENST00000585238 82 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 UBE2V2P2-201ENST00000587677 504 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 VN1R85P-201ENST00000601587 426 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC104985.2-201ENST00000620598 500 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC034229.5-201ENST00000624258 185 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 AC092326.2-201ENST00000624772 1561 ntBASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC163A0A0D9SF12 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 MFSD8-242ENST00000641690 4199 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-1287P-201ENST00000362914 107 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 RN7SKP145-201ENST00000363291 303 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA32.2-201ENST00000384049 122 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-1060P-201ENST00000384664 107 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL606923.1-201ENST00000406616 190 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 U3.32-201ENST00000408116 212 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC012498.1-201ENST00000424037 437 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 MTND3P23-201ENST00000431980 347 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 GAPDHP27-201ENST00000447427 1020 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 HMGN1P12-201ENST00000499125 195 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC092436.1-201ENST00000506450 503 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC108078.2-201ENST00000510750 236 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 PSMA2P1-201ENST00000526365 646 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 OR5B19P-201ENST00000531766 928 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 OR5BN1P-201ENST00000532955 829 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC027369.5-201ENST00000533838 755 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL359219.2-201ENST00000555184 348 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 BNIP3P22-201ENST00000593399 556 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC006504.8-201ENST00000621046 635 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 MTND4P14-201ENST00000435799 1354 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL365440.1-201ENST00000436135 2167 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 AL133243.3-201ENST00000617415 3004 ntBASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC163A0A0D9SF12 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms