Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Z98742.2-201ENST00000431564 187 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 RPS26P56-201ENST00000444468 240 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 ZNF37BP-203ENST00000452306 1352 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 BZW1P2-201ENST00000473537 826 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 RPL9P6-201ENST00000492764 598 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC022690.1-201ENST00000526681 550 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AP003385.6-201ENST00000531603 374 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC074029.1-201ENST00000552531 1044 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC104581.2-201ENST00000572227 430 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC068790.3-201ENST00000602988 553 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AC116618.1-201ENST00000634617 774 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AL049737.1-201ENST00000413920 1403 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 Y_RNA.62-201ENST00000362840 99 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU6-244P-201ENST00000391028 104 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 SNORD65-201ENST00000391079 73 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AL355497.1-201ENST00000406262 551 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 SDCBPP1-201ENST00000440192 890 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AL831737.1-201ENST00000441288 271 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC096638.1-201ENST00000444678 216 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 UBE2V2P4-201ENST00000447495 259 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 RPL31P50-201ENST00000471002 296 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC079203.1-201ENST00000487972 404 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 OR52A4P-203ENST00000498233 1014 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 MTND3P24-201ENST00000506306 329 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 SNORA31.23-201ENST00000517219 133 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC083923.1-201ENST00000523708 376 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 HSPE1P3-201ENST00000559254 309 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 NUTF2P8-201ENST00000604593 363 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC006963.1-201ENST00000624003 1052 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AC046144.1-201ENST00000478559 1853 ntBASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
TRAV1-2A0A0B4J238 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 MIR524-201ENST00000385242 87 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC008173.1-201ENST00000418901 264 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 SYPL1P1-201ENST00000473622 768 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 NDUFS5P6-201ENST00000529136 295 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AP005435.4-201ENST00000529514 284 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC090751.1-201ENST00000566966 267 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC245036.5-201ENST00000596330 847 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC011472.4-201ENST00000615848 491 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC099654.7-201ENST00000635788 2127 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 AC022031.1-201ENST00000585985 2593 ntBASIC1.51□□□□□ -2.17
TRAV1-2A0A0B4J238 MTCO1P4-201ENST00000520516 1409 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 RNU6-1293P-201ENST00000384077 107 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 MIR1294-201ENST00000408503 142 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 RPS20P15-201ENST00000412792 311 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 MTCYBP24-201ENST00000420387 1106 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC010285.1-201ENST00000470580 392 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 RPL7P18-201ENST00000478965 734 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 OR4G11P-201ENST00000492842 939 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC105914.1-201ENST00000511798 226 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 RN7SKP31-201ENST00000516354 278 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC026241.1-201ENST00000517873 2142 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 AC106734.1-201ENST00000568646 663 ntBASIC1.5□□□□□ -2.17
TRAV1-2A0A0B4J238 OR4K8P-201ENST00000578842 1048 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms