Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 RPL7P49-201ENST00000471402 708 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC106707.2-201ENST00000484182 374 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC026801.1-201ENST00000497178 464 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 PCNAP1-201ENST00000505363 709 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC096745.1-201ENST00000509945 370 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC008676.3-201ENST00000521237 435 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 ARL6IP1P1-201ENST00000545836 610 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC025588.3-201ENST00000604182 274 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC021749.1-201ENST00000604322 607 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AL355365.1-201ENST00000616480 294 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC024023.1-201ENST00000624530 922 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 MTCO1P4-201ENST00000520516 1409 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 OR4G2P-202ENST00000641004 1759 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC016716.1-201ENST00000265882 708 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 U8.3-201ENST00000363321 132 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 RNU6-270P-201ENST00000364131 105 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 RNU6-173P-201ENST00000364215 104 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 RNA5SP505-201ENST00000364748 108 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 U3.22-201ENST00000391120 215 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 VN1R51P-201ENST00000411675 945 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 RPF2P1-201ENST00000424137 906 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC090774.1-201ENST00000435925 246 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC006028.1-201ENST00000438379 402 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC005297.2-201ENST00000450430 606 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 EEF1B2P7-201ENST00000451177 676 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AP001486.1-201ENST00000463339 476 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 RPL7P19-201ENST00000469948 618 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC093663.2-201ENST00000484625 313 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 RPS29P20-201ENST00000489592 171 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC008885.1-201ENST00000514930 301 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 SCARNA17.1-201ENST00000516211 143 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 SCARNA17.2-201ENST00000516334 143 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 SNORA31.13-201ENST00000516624 135 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC009812.2-201ENST00000517657 457 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AP005639.2-201ENST00000527592 928 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC022880.1-201ENST00000534017 973 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 GTF2IP22-201ENST00000554443 182 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 HSBP1P1-201ENST00000555205 166 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC023158.1-201ENST00000561632 1025 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC068135.2-201ENST00000569293 1028 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 MIR5571-201ENST00000577998 113 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 MIR5007-201ENST00000583098 95 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AC005034.5-201ENST00000604219 466 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 FAM25E-202ENST00000608562 189 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 SCARNA17.4-201ENST00000614296 143 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 MIR6774-201ENST00000614651 70 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 AP003399.1-201ENST00000637534 361 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01558Q9Y6Z2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 ELF2P3-201ENST00000445099 1506 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 RNU4-23P-201ENST00000362839 140 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 RNU1-112P-201ENST00000364401 164 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 RNU6-1226P-201ENST00000384317 107 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 SNORA67.4-201ENST00000384688 142 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 UBA52P6-201ENST00000399822 382 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 AL136372.1-201ENST00000403060 228 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 SMC4P1-201ENST00000414479 527 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 AL161449.1-201ENST00000414531 1199 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 RPL27AP8-201ENST00000424277 446 ntBASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.05□□□□□ -2.24
LINC01558Q9Y6Z2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms