Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL732618.1-201ENST00000623251 301 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AL136313.1-201ENST00000624804 202 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC068724.3-201ENST00000625906 87 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 GABPAP-201ENST00000419271 1356 ntBASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A3BPQ9Y5P4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU4-1-201ENST00000363925 141 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 SNORA20.2-201ENST00000383922 131 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 SNORA36C-201ENST00000384289 132 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AL356967.1-201ENST00000406305 431 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AL356867.1-201ENST00000429623 299 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 USP9YP14-201ENST00000430663 563 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 NANOGP10-201ENST00000453325 895 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 RBM43P1-201ENST00000476891 1081 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC020593.1-201ENST00000507399 299 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 MTCO1P35-201ENST00000515270 228 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU6-390P-201ENST00000516259 103 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AP001804.3-201ENST00000525146 880 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC128657.1-201ENST00000549459 145 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC087883.1-201ENST00000551882 391 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AL391840.1-201ENST00000571144 367 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC098679.4-201ENST00000624241 654 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 AC008013.2-202ENST00000637965 364 ntBASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A3BPQ9Y5P4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR1179-201ENST00000408703 91 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU6-195P-201ENST00000411352 109 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC104850.1-201ENST00000435940 476 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC114755.5-201ENST00000447760 831 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 MTND2P24-201ENST00000453434 806 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL359385.1-201ENST00000456509 365 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 SNORD97-201ENST00000459187 142 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL9P32-201ENST00000464118 620 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 RPS27AP13-201ENST00000498403 237 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL355836.1-201ENST00000555951 870 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AP005205.1-201ENST00000563503 508 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC007224.1-201ENST00000564410 144 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR4293-201ENST00000584305 78 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL161729.4-201ENST00000604650 476 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AP000860.1-201ENST00000605250 559 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL591034.3-201ENST00000605511 685 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC098614.4-201ENST00000607601 462 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010133.1-201ENST00000615809 842 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 AL359740.1-201ENST00000624340 592 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR492-201ENST00000638676 116 ntBASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
COL4A3BPQ9Y5P4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms