Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HDGFL3Q9Y3E1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HDGFL3Q9Y3E1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AL512283.1-201ENST00000606756 1384 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 RNU6-796P-201ENST00000391086 107 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 U3.29-201ENST00000391296 212 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AC129850.1-201ENST00000436203 508 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 LSM1P1-201ENST00000438629 273 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AC007000.2-201ENST00000442564 487 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 OR6K5P-201ENST00000447050 945 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AL109933.2-201ENST00000452651 260 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 CBX3P3-201ENST00000508108 532 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 RNU6-416P-201ENST00000516265 103 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 LSM6P2-201ENST00000552208 177 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AC106782.4-201ENST00000568264 210 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AC104237.2-201ENST00000612456 443 ntBASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HDGFL3Q9Y3E1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 MIR6073-201ENST00000352083 89 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 RNA5SP139-201ENST00000364340 117 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 MIR525-201ENST00000384978 85 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 MIR493-201ENST00000385254 89 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AL136372.1-201ENST00000403060 228 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AL929288.2-201ENST00000446368 407 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 TRBV26-201ENST00000456572 344 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 snoU109.4-201ENST00000458953 143 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AP001486.1-201ENST00000463339 476 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 OR10V3P-201ENST00000525712 725 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 OR5BN1P-201ENST00000532955 829 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AC128657.1-201ENST00000549459 145 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 EEF1B2P4-201ENST00000551398 348 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 TPMTP1-201ENST00000592307 737 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 RPL23AP78-201ENST00000599928 470 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AL020997.3-201ENST00000602843 359 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AC055876.5-201ENST00000605667 259 ntBASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.28□□□□□ -2.04
HDGFL3Q9Y3E1 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.28□□□□□ -2.05
HDGFL3Q9Y3E1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 RNA5SP456-201ENST00000364002 114 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AL122016.1-201ENST00000403365 367 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC092447.6-201ENST00000414578 210 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 CR769767.1-201ENST00000436337 346 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC234775.1-201ENST00000454247 670 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AL109741.2-201ENST00000455561 343 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 RPS27P27-201ENST00000498779 255 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC060766.3-201ENST00000591442 263 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 RPL12P50-201ENST00000603116 116 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AC112503.2-201ENST00000609005 552 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 AL162233.1-201ENST00000620014 944 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 FO624990.1-201ENST00000636373 85 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 ZNF663P-202ENST00000641770 1131 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.27□□□□□ -2.05
HDGFL3Q9Y3E1 NUP58P1-201ENST00000502546 1738 ntBASIC2.26□□□□□ -2.05
HDGFL3Q9Y3E1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HDGFL3Q9Y3E1 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.26□□□□□ -2.05
HDGFL3Q9Y3E1 AL356057.2-201ENST00000403318 432 ntBASIC2.26□□□□□ -2.05
HDGFL3Q9Y3E1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HDGFL3Q9Y3E1 RNU2-25P-201ENST00000411041 191 ntBASIC2.26□□□□□ -2.05
HDGFL3Q9Y3E1 OR51A3P-201ENST00000413596 924 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms