Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 FAM172BP-201ENST00000487497 1089 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 FABP5P6-201ENST00000510588 409 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 MTCO3P44-201ENST00000510977 541 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 CCNHP1-201ENST00000513311 678 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 RNU2-44P-201ENST00000516795 194 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 HMGB1P46-201ENST00000520062 610 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC083923.1-201ENST00000523708 376 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 MIR3162-201ENST00000581818 82 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC008749.1-201ENST00000597650 306 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AL390838.2-201ENST00000602394 274 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 AC011472.4-201ENST00000615848 491 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
UBE2D4Q9Y2X8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UBE2D4Q9Y2X8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
UBE2D4Q9Y2X8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
UBE2D4Q9Y2X8 RNA5SP252-201ENST00000391131 119 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 RPL31P20-201ENST00000449593 360 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 PSPHP1-201ENST00000450062 261 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 TPMTP4-201ENST00000450749 678 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 RPL5P13-201ENST00000462840 709 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC078857.1-201ENST00000469870 667 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 RN7SKP283-201ENST00000517197 270 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 FAM92A1P1-201ENST00000528023 890 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 MIR4513-201ENST00000581077 86 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AP004247.3-201ENST00000608682 624 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC009487.4-201ENST00000624969 3585 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.4□□□□□ -2.19
UBE2D4Q9Y2X8 AC006020.1-201ENST00000420179 1854 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 MTND5P6-201ENST00000422338 1798 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 MTND4P35-201ENST00000604257 1375 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 RNA5SP289-201ENST00000362332 137 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 BTF3P9-201ENST00000418784 283 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC027124.2-201ENST00000428249 105 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC233279.1-201ENST00000455300 423 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 RNU7-27P-201ENST00000459281 62 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC010285.1-201ENST00000470580 392 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 MTCO2P9-201ENST00000503214 694 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC034244.2-201ENST00000514668 858 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AP000889.1-201ENST00000530968 660 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 DNAJC19P3-201ENST00000594491 331 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AL136363.1-201ENST00000605349 337 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC007620.3-201ENST00000608131 497 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AL590099.1-201ENST00000615276 138 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC006963.1-201ENST00000624003 1052 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 MFSD8-245ENST00000641743 948 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AL354685.2-201ENST00000448218 1447 ntBASIC1.39□□□□□ -2.19
UBE2D4Q9Y2X8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AL139156.1-201ENST00000412785 841 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AL135786.1-201ENST00000415892 214 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 ZNF90P2-204ENST00000419323 1075 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 MTCYBP7-201ENST00000419540 1134 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 OR51AB1P-201ENST00000429046 620 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AC114973.1-201ENST00000429057 632 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AL451074.3-201ENST00000437709 472 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 LARP7P4-201ENST00000481075 878 ntBASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.38□□□□□ -2.19
UBE2D4Q9Y2X8 CYCSP26-201ENST00000534107 320 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms