Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RNU6-283P-201ENST00000364788 107 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RNU1-64P-201ENST00000365443 163 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RNU6-1200P-201ENST00000384162 107 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 MIR325-201ENST00000385260 98 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RSL24D1P4-201ENST00000400938 484 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 UBE2FP1-201ENST00000416536 447 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC002075.2-201ENST00000425207 252 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 SETD6P1-201ENST00000444575 317 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RPS29P31-201ENST00000446147 164 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 TPT1P14-201ENST00000448018 505 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AL162389.1-201ENST00000449233 177 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 SNRPGP6-201ENST00000451124 220 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 OR6K1P-201ENST00000456766 971 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AP1S2P1-201ENST00000457344 379 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RPL21P8-201ENST00000465083 535 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC034236.1-201ENST00000469891 373 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 TTC39CP1-201ENST00000512513 755 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AP004247.1-201ENST00000531556 1289 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 OR7K1P-201ENST00000546439 926 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 RN7SL703P-201ENST00000578485 302 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 MIR5685-201ENST00000579080 79 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 MIR544B-201ENST00000582372 78 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 MIR4999-201ENST00000585029 91 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 UBE2L4-201ENST00000587688 464 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC013553.2-201ENST00000604244 589 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC013476.2-201ENST00000614456 459 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC079684.1-201ENST00000621405 437 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AL158801.5-201ENST00000623123 465 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC112204.3-201ENST00000623822 332 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 SNORA50A-202ENST00000629536 136 ntBASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
FOXA2Q9Y261 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FOXA2Q9Y261 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3□□□□□ -1.93
FOXA2Q9Y261 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXA2Q9Y261 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FOXA2Q9Y261 RNU6-1214P-201ENST00000363650 109 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 RNU1-39P-201ENST00000383897 165 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 SNORA48.8-201ENST00000391324 134 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 TXNP7-201ENST00000406296 293 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AL356967.1-201ENST00000406305 431 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 HMGN1P24-201ENST00000412282 298 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 RPL30P2-201ENST00000414021 291 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 SPA17P1-201ENST00000416656 452 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 HMGB3P20-201ENST00000417997 600 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC006989.1-201ENST00000427212 131 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AL512844.2-201ENST00000433990 593 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AL831737.1-201ENST00000441288 271 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 RPL21P133-201ENST00000443666 476 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3□□□□□ -1.93
FOXA2Q9Y261 RPS20P20-201ENST00000460498 340 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3□□□□□ -1.93
FOXA2Q9Y261 NPM1P41-201ENST00000512920 831 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3□□□□□ -1.93
FOXA2Q9Y261 MRPS36P3-201ENST00000519284 130 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AC022695.1-201ENST00000522089 237 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC087276.1-201ENST00000529659 480 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AL121766.1-201ENST00000547436 487 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 ELOCP32-201ENST00000548625 324 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC004024.1-201ENST00000549244 247 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 OR4T1P-201ENST00000554933 911 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3□□□□□ -1.93
FOXA2Q9Y261 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AF038458.1-201ENST00000588406 262 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3□□□□□ -1.93
FOXA2Q9Y261 AL020997.2-201ENST00000602607 184 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC099778.2-201ENST00000610904 211 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 AC093838.1-201ENST00000613014 469 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 TUG1_2.1-201ENST00000614234 87 ntBASIC3□□□□□ -1.93
FOXA2Q9Y261 FP236240.3-201ENST00000623061 327 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms