Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC012119.1-201ENST00000603184 222 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 BNIP3P11-201ENST00000603878 563 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 AL390208.1-201ENST00000605885 644 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 AC097504.2-201ENST00000608088 454 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 AC069234.5-201ENST00000611056 416 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 PART1_2.1-201ENST00000612397 250 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 MIR6076-201ENST00000617521 113 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 AL121895.2-201ENST00000619558 447 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 AC099506.2-201ENST00000623074 221 ntBASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP2BQ9UQN3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.09□□□□□ -1.92
CHMP2BQ9UQN3 AC092435.3-201ENST00000565538 3654 ntBASIC3.09□□□□□ -1.92
CHMP2BQ9UQN3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CHMP2BQ9UQN3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHMP2BQ9UQN3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC011460.1-201ENST00000636268 1834 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 FRG1BP-201ENST00000278882 761 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 MIR134-201ENST00000385258 73 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 PTMAP2-201ENST00000397627 327 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 RPS3AP26-201ENST00000398259 784 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 RPS4XP3-201ENST00000398541 413 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 HMGB1P17-201ENST00000403495 628 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 FAT1P1-201ENST00000406588 507 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AL590084.1-201ENST00000407885 387 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 RNA5SP80-201ENST00000410475 111 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC097713.2-201ENST00000430199 356 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 NANOGP2-201ENST00000435391 727 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC020898.1-201ENST00000474167 787 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 RPL31P60-201ENST00000478450 367 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC109464.2-201ENST00000510242 943 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 RNY4P37-201ENST00000516225 96 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 BNIP3P27-201ENST00000599991 412 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC069431.2-201ENST00000604149 1099 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AP002826.1-201ENST00000608835 315 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AC138932.5-201ENST00000617759 563 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AL596245.1-201ENST00000618994 362 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.08□□□□□ -1.92
CHMP2BQ9UQN3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 SNORA62.3-201ENST00000365110 153 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 SNORA7.4-201ENST00000384249 137 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 TAF9BP1-201ENST00000396646 746 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AL031679.1-201ENST00000400616 525 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 RPL7P10-201ENST00000417407 739 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AC109583.1-201ENST00000432156 268 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 RPL26P6-201ENST00000440913 438 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 MTCO1P53-201ENST00000441633 699 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 RNF2P1-201ENST00000442955 1010 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 RPL39P40-201ENST00000445481 146 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AL358794.1-201ENST00000445689 381 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AL590664.1-201ENST00000448065 339 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AC011979.1-201ENST00000472300 483 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AC109925.1-201ENST00000478069 331 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 RPL30P14-201ENST00000482744 348 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 XKRY-201ENST00000510392 1100 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 AC006499.2-201ENST00000513470 337 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 RN7SKP157-201ENST00000516174 282 ntBASIC3.07□□□□□ -1.92
CHMP2BQ9UQN3 MTND2P7-201ENST00000521337 640 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms