Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RHOT1P3-201ENST00000436571 331 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RPL35AP21-201ENST00000437667 333 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC105402.2-201ENST00000438503 358 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC127537.2-201ENST00000439258 465 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RPS17P13-201ENST00000448974 407 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 HMGB3P21-201ENST00000452483 547 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 SCARNA18-201ENST00000459004 134 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RPL21P8-201ENST00000465083 535 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 DYNLL1P5-201ENST00000467158 270 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 FTH1P24-201ENST00000503502 462 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 COX7A2P2-201ENST00000505291 250 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 COX6B1P5-201ENST00000509843 249 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC107222.1-201ENST00000510899 637 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC104136.1-201ENST00000512969 394 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RNA5SP43-201ENST00000516559 110 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 RNU6-1092P-201ENST00000516955 87 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 OR8R1P-201ENST00000543943 764 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC006116.3-201ENST00000592968 361 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC018889.1-201ENST00000605372 397 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AL121612.2-201ENST00000612261 482 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 MIR6864-201ENST00000617935 70 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AL445363.3-201ENST00000623080 671 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 AC073869.10-201ENST00000642016 354 ntBASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.2□□□□□ -1.58
AP4E1Q9UPM8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 RNU6-562P-201ENST00000362731 107 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 U3.29-201ENST00000391296 212 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC013442.1-201ENST00000397347 228 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 MIR450B-201ENST00000401182 78 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AL445189.1-201ENST00000405722 338 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 RNU6-387P-201ENST00000411331 105 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 RNA5SP107-201ENST00000411358 122 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 BX682237.1-201ENST00000415016 335 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC008267.5-201ENST00000424928 265 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC093106.2-201ENST00000428212 385 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC092013.1-201ENST00000438795 332 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 SUMO1P3-201ENST00000439961 304 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AL163193.1-201ENST00000444895 788 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 RPS17P2-201ENST00000461663 408 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC103987.1-201ENST00000473394 348 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 COX6B1P2-201ENST00000489624 230 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC108078.2-201ENST00000510750 236 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC016065.2-201ENST00000514530 444 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC087854.1-201ENST00000519706 414 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 IGLV2-28-201ENST00000520681 304 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC104695.3-201ENST00000604052 296 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC009229.3-201ENST00000608056 282 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AC107871.2-201ENST00000612894 502 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 AL122126.1-201ENST00000546905 1318 ntBASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP4E1Q9UPM8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms