Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 USP9YP36-201ENST00000424581 829 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 MTATP6P4-201ENST00000427725 675 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 MTCO1P3-201ENST00000429327 192 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC004866.2-201ENST00000438285 481 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 PTGES3P1-201ENST00000439531 483 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC093155.1-201ENST00000440164 826 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AL589880.1-201ENST00000448271 287 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 USP9YP34-201ENST00000453983 808 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 CBX3P3-201ENST00000508108 532 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AP001804.3-201ENST00000525146 880 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC010653.1-201ENST00000571108 881 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AL445435.1-201ENST00000604232 665 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AP002802.2-201ENST00000605877 235 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC010975.3-201ENST00000618727 978 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC006111.3-201ENST00000622137 383 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC090897.3-201ENST00000636973 1157 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 U6.101-201ENST00000637707 76 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC090740.1-201ENST00000623193 2262 ntBASIC3.04□□□□□ -1.92
CDH9Q9ULB4 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 SNORD65.1-201ENST00000390889 71 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AL079342.2-201ENST00000403367 482 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AL137014.1-201ENST00000420490 1226 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 SEPT7P5-201ENST00000434048 306 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 RPS24P13-201ENST00000442520 397 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 MTCYBP42-201ENST00000444653 1130 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 RNA5SP310-201ENST00000459084 116 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC138915.2-201ENST00000569776 97 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH9Q9ULB4 ELOCP29-201ENST00000588193 334 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC009220.3-201ENST00000604318 586 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AL022099.1-201ENST00000604551 712 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC022509.4-201ENST00000621404 572 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AC009039.2-201ENST00000624524 529 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 MKKS-204ENST00000639674 192 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 AL355596.1-201ENST00000565399 3996 ntBASIC3.03□□□□□ -1.92
CDH9Q9ULB4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
CDH9Q9ULB4 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 MAPK10-322ENST00000641485 4530 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 CUL1P1-201ENST00000509510 2425 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AL513185.3-201ENST00000433335 1300 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 OR5J1P-201ENST00000313544 939 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 ANKRD36P1-201ENST00000344424 659 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 RNU1-35P-201ENST00000362782 153 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC104332.2-201ENST00000429959 156 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 OR6K5P-201ENST00000447050 945 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC026801.2-201ENST00000515352 425 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 SNORA31.1-201ENST00000515993 133 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 SNORA31.5-201ENST00000516190 133 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 NDUFS5P6-201ENST00000529136 295 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH9Q9ULB4 AC125611.1-201ENST00000549563 229 ntBASIC3.02□□□□□ -1.93
CDH9Q9ULB4 SETP7-201ENST00000552169 453 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms