Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 SGO1P1-201ENST00000603525 1447 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 RNU6-609P-201ENST00000365459 107 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 RNU6-650P-201ENST00000365658 111 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 TMSB4XP8-201ENST00000402089 135 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AL133384.1-201ENST00000412744 351 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC092447.6-201ENST00000414578 210 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 TMSB4XP6-201ENST00000415187 135 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AL158050.1-201ENST00000416077 457 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 TMSB4XP1-201ENST00000424567 135 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC087499.2-201ENST00000432861 149 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 MTND4P15-201ENST00000437913 1033 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC105272.1-201ENST00000438604 198 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 MTCO3P2-201ENST00000457365 171 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 DYNLL1P6-201ENST00000503440 264 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 NIFKP8-201ENST00000560500 874 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC124283.4-201ENST00000581815 456 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC091057.2-201ENST00000602594 792 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC008277.2-201ENST00000605196 797 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 AC008083.4-201ENST00000615076 444 ntBASIC3.31□□□□□ -1.88
CTNNA3Q9UI47 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 RNA5SP139-201ENST00000364340 117 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 MIR16-1-201ENST00000385271 89 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AL035407.1-201ENST00000429211 571 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC012497.1-201ENST00000429392 575 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 MTND4LP10-201ENST00000435146 291 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AL589880.1-201ENST00000448271 287 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 RNU6-1102P-201ENST00000516149 96 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 COX6CP8-201ENST00000522620 226 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AP000857.1-201ENST00000532151 543 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 CYCSP39-201ENST00000565821 309 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 NRBF2P5-201ENST00000603087 788 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AP000787.2-201ENST00000604432 568 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC010738.1-201ENST00000604970 987 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC097460.3-201ENST00000623099 442 ntBASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CTNNA3Q9UI47 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 RNU4-82P-201ENST00000362443 140 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 RNU6-115P-201ENST00000364310 107 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AL138827.1-201ENST00000402666 306 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 MTCO1P39-201ENST00000426148 480 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 OR6K5P-201ENST00000447050 945 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 RPL23AP11-201ENST00000475260 469 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 MIR4319-201ENST00000577285 85 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AL133507.1-201ENST00000605269 557 ntBASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNA3Q9UI47 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AL512633.1-201ENST00000399931 655 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 RPS4XP8-201ENST00000402039 771 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 RNA5SP508-201ENST00000411327 119 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 NUP35P1-201ENST00000422734 947 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC063976.3-201ENST00000426849 329 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 Z96811.1-201ENST00000445880 108 ntBASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.28□□□□□ -1.88
CTNNA3Q9UI47 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms