Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 ARF4P1-201ENST00000605447 541 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC113194.1-201ENST00000606037 500 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC017083.3-201ENST00000609955 700 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC019278.1-201ENST00000623516 479 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MAPK10-372ENST00000641954 3413 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 FRG1BP-201ENST00000278882 761 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AL161781.1-201ENST00000354277 403 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 SNORD66.1-201ENST00000391230 76 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RNA5SP36-201ENST00000410197 133 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC138393.2-201ENST00000414742 246 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RPL23AP38-201ENST00000423801 469 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AL353777.1-201ENST00000425552 326 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 ISCA1P6-201ENST00000427740 390 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC073464.1-201ENST00000429823 534 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 MTND5P20-201ENST00000448677 143 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC132479.1-201ENST00000449160 144 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 ABCF2P2-201ENST00000450549 296 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 C1DP4-201ENST00000455429 424 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RPL38P1-201ENST00000460914 211 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC104164.2-201ENST00000496953 495 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC108145.1-201ENST00000503770 153 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC139783.2-201ENST00000504847 1145 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 TXNP6-201ENST00000510190 310 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RNA5SP519-201ENST00000516480 119 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 RNU6-714P-201ENST00000516963 103 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 MRPL49P2-201ENST00000521066 465 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC109635.3-201ENST00000529536 185 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AP003034.1-201ENST00000534621 422 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AL512310.1-201ENST00000548639 172 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 ADI1P3-201ENST00000549509 470 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC025884.1-201ENST00000556034 378 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC007363.1-201ENST00000604736 620 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC004009.2-201ENST00000623016 728 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 LRRC77P-213ENST00000637727 880 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.29□□□□□ -1.72
DKK3Q9UBP4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DKK3Q9UBP4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 Y_RNA.1-201ENST00000352915 104 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 SNORA62.3-201ENST00000365110 153 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 SNORA70.4-201ENST00000365509 134 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 MIR670-201ENST00000390142 98 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 RPS26P8-201ENST00000393490 348 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 RNU2-21P-201ENST00000410368 188 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 AC069218.2-201ENST00000411665 344 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 snoU13.7-201ENST00000459220 104 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 PPIAP15-201ENST00000479662 484 ntBASIC4.28□□□□□ -1.72
DKK3Q9UBP4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.28□□□□□ -1.72
DKK3Q9UBP4 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms