Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 RPL21P131-201ENST00000497298 483 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC006445.2-201ENST00000510061 472 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC019227.1-201ENST00000526902 510 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MTCYBP41-201ENST00000528913 1123 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC004923.2-201ENST00000529649 369 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AP000873.5-201ENST00000533906 236 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MIR4446-201ENST00000578505 67 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 TUG1_1.1-201ENST00000610654 145 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC011890.2-201ENST00000613393 294 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC009032.1-201ENST00000617574 431 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MIR219B-201ENST00000637023 88 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC083799.1-201ENST00000366451 910 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 RNU1-73P-201ENST00000383971 164 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 RNU6-1293P-201ENST00000384077 107 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MTND2P21-201ENST00000436242 1042 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MRPL35P4-201ENST00000453682 566 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 RPS4XP6-201ENST00000477670 797 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC090543.1-201ENST00000492168 485 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 RNU6-156P-201ENST00000621869 107 ntBASIC2.08□□□□□ -2.08
CCDC88CQ9P219 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC88CQ9P219 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC092745.2-202ENST00000411880 369 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC011816.1-201ENST00000441346 546 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 HMGN2P13-201ENST00000476476 274 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 HMGB1P38-201ENST00000490557 577 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 RNU6-551P-201ENST00000516661 103 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 SNORD59.2-201ENST00000516873 68 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 HAUS1P3-201ENST00000523909 662 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC087241.2-201ENST00000535801 324 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AL158827.2-201ENST00000602494 330 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 NTAN1P1-201ENST00000603150 646 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC025016.1-201ENST00000616746 682 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AL691447.3-201ENST00000635020 330 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 FAM133CP-201ENST00000332869 704 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 ANAPC10P1-201ENST00000395991 556 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 MIR1289-2-201ENST00000408360 111 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 RPL17P49-201ENST00000443728 411 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 RBM43P1-201ENST00000476891 1081 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC88CQ9P219 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 RPS15AP40-201ENST00000419621 391 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC096638.1-201ENST00000444678 216 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 Y_RNA.638-201ENST00000459374 113 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 SNORA31.13-201ENST00000516624 135 ntBASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC88CQ9P219 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms