Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 SNORA11F-201ENST00000408237 128 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RNU2-8P-201ENST00000410727 190 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AL359704.1-201ENST00000411586 781 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AL356387.2-201ENST00000422272 243 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 MTND1P14-201ENST00000427400 950 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 ELOCP18-201ENST00000434209 337 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RPS15AP9-201ENST00000439856 381 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AL451050.1-201ENST00000450126 415 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RPS20P32-201ENST00000456044 356 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 HMGB3P30-201ENST00000457863 606 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RPL36AP51-201ENST00000487216 318 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC023194.1-201ENST00000493084 308 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-835P-201ENST00000516974 104 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC006064.5-201ENST00000541782 248 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC135001.1-201ENST00000544546 283 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AL109766.1-201ENST00000555080 552 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC005261.5-201ENST00000596280 355 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 IGHV3-29-201ENST00000604817 344 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AL121757.2-201ENST00000611223 313 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RMST_3.1-201ENST00000611651 109 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC004825.2-201ENST00000616634 455 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC007546.1-201ENST00000619452 559 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC009318.4-201ENST00000620496 486 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 MIR4727-201ENST00000622232 55 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AP003400.5-201ENST00000624827 617 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 MAPK10-253ENST00000641010 4072 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-28P-201ENST00000362378 107 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-1322P-201ENST00000364309 107 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-169P-201ENST00000365336 107 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 MT-TC-201ENST00000387405 66 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 SNRPEP10-201ENST00000420249 274 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AL035410.1-201ENST00000427409 427 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 GTF2IP20-201ENST00000431663 360 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 PHBP16-201ENST00000446318 950 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AL136380.1-201ENST00000447970 162 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 PMCHL2-203ENST00000457791 237 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 OR5H5P-201ENST00000503164 928 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC010587.1-201ENST00000505809 469 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC111000.3-201ENST00000508057 576 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC114786.4-201ENST00000508771 728 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 PARP4P3-201ENST00000510265 317 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 Vault.1-201ENST00000516474 102 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AP003385.6-201ENST00000531603 374 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AL356432.3-201ENST00000568952 465 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC099489.2-201ENST00000574976 260 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AL162413.1-201ENST00000603198 110 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC113403.1-201ENST00000604910 193 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 MIR432-201ENST00000606207 94 ntBASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SH3BP4Q9P0V3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms