Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RN7SKP280-201ENST00000364196 304 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-343P-201ENST00000364709 104 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-1215P-201ENST00000384441 102 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 SNORA57.1-201ENST00000391227 145 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL024474.1-201ENST00000404655 591 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 U3.39-201ENST00000408569 239 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RN7SKP156-201ENST00000410308 342 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RNU2-66P-201ENST00000410650 161 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC068533.1-201ENST00000418542 415 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RPS15AP40-201ENST00000419621 391 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 OFD1P18Y-201ENST00000420889 959 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL356583.2-201ENST00000426536 280 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL591419.1-201ENST00000427423 339 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC104651.1-201ENST00000427559 735 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC092641.1-201ENST00000440229 772 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 TXNP1-201ENST00000441872 371 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL022238.1-201ENST00000442557 355 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC002381.1-201ENST00000447049 280 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 ARPC3P5-201ENST00000448802 534 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 USP9YP34-201ENST00000453983 808 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 OR6K1P-201ENST00000456766 971 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 BTF3P5-201ENST00000457252 467 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RNU7-170P-201ENST00000459303 61 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 HMGB1P36-201ENST00000487709 576 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 NIPA2P2-201ENST00000496376 1083 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC020893.1-201ENST00000502452 580 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC021678.1-201ENST00000505195 936 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC034159.1-201ENST00000513885 583 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 FABP5P5-201ENST00000515537 406 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 SNORA70.18-201ENST00000516696 98 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 OR6C73P-201ENST00000546432 358 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC245505.1-201ENST00000556398 224 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 MIR5697-201ENST00000578045 78 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC005771.1-201ENST00000585581 349 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC067852.3-201ENST00000589177 561 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC091805.2-201ENST00000603848 235 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC103710.3-201ENST00000608157 948 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC006566.1-201ENST00000608943 513 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC018755.4-201ENST00000619715 454 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AC006065.5-201ENST00000623427 349 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AL359740.1-201ENST00000624340 592 ntBASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMARCAL1Q9NZC9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SMARCAL1Q9NZC9 ZNF33CP-201ENST00000432492 2030 ntBASIC3.71□□□□□ -1.81
SMARCAL1Q9NZC9 AL356473.1-201ENST00000406203 1408 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC027514.1-201ENST00000588561 1603 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 RPL23AP57-201ENST00000332361 466 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 RNU6-809P-201ENST00000384461 107 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 RPL31P1-201ENST00000398116 372 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AL031679.1-201ENST00000400616 525 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 FNDC3CP-201ENST00000420795 1155 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC245054.1-201ENST00000420944 258 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 GLRXP1-201ENST00000423261 334 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC017083.1-201ENST00000428093 483 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 HMGN2P21-201ENST00000447764 270 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 PAXBP1P1-201ENST00000449315 447 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC010655.1-201ENST00000449336 292 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 MTCYBP1-201ENST00000454315 1119 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC007967.1-201ENST00000455422 1159 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 SUMO2P2-201ENST00000456482 255 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 RPS20P21-201ENST00000466859 343 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 PABPC1P3-201ENST00000469174 459 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 RN7SL442P-201ENST00000473804 320 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC106872.3-201ENST00000495104 446 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 CDC42P4-201ENST00000510507 563 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms