Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC246680.2-201ENST00000422106 389 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 Z93242.1-201ENST00000427102 353 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 OR2AS1P-201ENST00000427827 319 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 FO393414.1-201ENST00000428697 1184 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 AC114973.1-201ENST00000429057 632 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 AC126389.1-201ENST00000477436 290 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 MTCO3P27-201ENST00000514397 196 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 HPRT1P3-201ENST00000539521 576 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 AL590396.4-201ENST00000636779 956 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 BX649567.1-201ENST00000642071 1134 ntBASIC3.23□□□□□ -1.89
HOXC10Q9NYD6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 RNU1-109P-201ENST00000383960 147 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 U6.112-201ENST00000384129 70 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 RNU6-821P-201ENST00000390995 107 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 HMGN2P30-201ENST00000423237 256 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 RPS6P14-201ENST00000425165 719 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 RPP40P1-201ENST00000426762 456 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 FTH1P1-201ENST00000437933 532 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AL592437.1-201ENST00000443781 492 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AP000936.2-201ENST00000447151 681 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC004022.1-201ENST00000447766 1066 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC092798.1-201ENST00000458542 409 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 NAP1L1P3-201ENST00000462291 880 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 OR5H5P-201ENST00000503164 928 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC006518.2-201ENST00000542513 940 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC090695.1-201ENST00000561269 1222 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC026790.2-201ENST00000606282 430 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AL158211.2-201ENST00000607282 395 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC244517.1-201ENST00000606030 2086 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AC026241.1-201ENST00000517873 2142 ntBASIC3.22□□□□□ -1.89
HOXC10Q9NYD6 AL049780.3-201ENST00000624612 1583 ntBASIC3.21□□□□□ -1.89
HOXC10Q9NYD6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 RNU6-859P-201ENST00000362728 107 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 RNU1-35P-201ENST00000362782 153 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 RNU6-236P-201ENST00000363886 106 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 MIR512-1-201ENST00000384913 84 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AL031679.1-201ENST00000400616 525 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AL355615.1-201ENST00000406187 641 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 RNU2-25P-201ENST00000411041 191 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC027644.1-201ENST00000419595 298 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 RNU4-29P-201ENST00000515943 174 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC128657.1-201ENST00000549459 145 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC074051.3-201ENST00000570238 358 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC002487.1-201ENST00000604565 994 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC106028.5-201ENST00000610332 395 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC084035.1-201ENST00000634543 607 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 AC010149.2-201ENST00000637608 315 ntBASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
HOXC10Q9NYD6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RNU6-921P-201ENST00000384361 107 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RNU6-1257P-201ENST00000384625 110 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 MIR34A-201ENST00000385130 110 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AL121978.1-201ENST00000402778 359 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RN7SKP284-201ENST00000411002 343 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RN7SKP58-201ENST00000411010 305 ntBASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC10Q9NYD6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms