Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RNU6-1322P-201ENST00000364309 107 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 SNORA71.2-201ENST00000364941 134 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RNU6-76P-201ENST00000384060 104 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RNU6-483P-201ENST00000384088 108 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC068050.1-201ENST00000394891 380 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RNU2-9P-201ENST00000410194 145 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 USP9YP27-201ENST00000418455 438 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC093162.1-201ENST00000419682 124 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 MTCO1P20-201ENST00000425366 358 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AL049745.1-201ENST00000433953 286 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC005154.2-201ENST00000438110 379 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC122718.1-201ENST00000439448 744 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC012671.1-201ENST00000451912 203 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 SNORD97-201ENST00000459187 142 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 FAM133DP-201ENST00000464802 691 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC005532.2-201ENST00000467154 373 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RPS27AP1-201ENST00000475545 471 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 FAM92A1P2-202ENST00000504766 877 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 OR4R1P-201ENST00000529879 463 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RPS3AP4-201ENST00000555161 764 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AL157700.1-201ENST00000561973 1432 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 FAM60BP-201ENST00000578364 658 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AF038458.1-201ENST00000588406 262 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC104458.1-201ENST00000608243 463 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC004696.1-201ENST00000614345 607 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RNA5SP167-201ENST00000365461 116 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RNU5E-6P-201ENST00000365574 115 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MIR513A2-201ENST00000385249 127 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC110754.1-201ENST00000399740 601 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AL359634.1-202ENST00000404721 284 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MIR1911-201ENST00000410783 80 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC009480.2-201ENST00000422916 432 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 DUTP6-201ENST00000425573 462 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MTATP6P4-201ENST00000427725 675 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC024082.2-201ENST00000434771 238 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RPL7P54-201ENST00000438336 674 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AL138799.3-201ENST00000438968 350 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AP000873.1-201ENST00000463987 400 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC010631.1-201ENST00000474150 156 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RN7SL177P-201ENST00000476596 299 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC078918.1-201ENST00000498515 228 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 MLLT10P2-201ENST00000506434 249 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RNA5SP73-201ENST00000516744 108 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC105233.3-201ENST00000531125 744 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC109635.4-202ENST00000531666 412 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AL109766.1-201ENST00000555080 552 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 HMGB1P6-201ENST00000569046 646 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC068135.2-201ENST00000569293 1028 ntBASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.41□□□□□ -1.7
MKS1Q9NXB0 AC006116.10-201ENST00000591836 581 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms