Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SCARNA20.6-201ENST00000517251 106 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 CR383656.7-201ENST00000548164 174 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 HIGD1AP1-201ENST00000550979 275 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC090888.2-201ENST00000559765 1144 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AL353997.4-201ENST00000586196 166 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 Z99289.3-201ENST00000605586 594 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC073657.2-201ENST00000605661 303 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC008147.4-201ENST00000617570 1204 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC004777.1-201ENST00000624317 287 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 CRYM-AS1-204ENST00000637983 556 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AL021368.2-201ENST00000606125 5352 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 RNU6-757P-201ENST00000410334 100 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 MTCO2P21-201ENST00000419780 677 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC005300.1-201ENST00000428401 373 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 TXNL1P1-201ENST00000429528 554 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 ZYG11AP1-201ENST00000430329 837 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 SNRPEP7-201ENST00000438350 220 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 RPS4XP22-201ENST00000480755 780 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 MTND2P14-201ENST00000482139 351 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 MTCO2P32-201ENST00000514865 403 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 RN7SKP289-201ENST00000517244 295 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AC069200.1-201ENST00000609511 323 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 AL157817.1-201ENST00000614264 790 ntBASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMC4Q9NTJ3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 RNU6-931P-201ENST00000363850 107 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 SNORA11.1-201ENST00000408133 129 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 MTND5P14-201ENST00000441481 1267 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 Z99127.3-201ENST00000448158 395 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC115115.1-201ENST00000449927 248 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 FAM172BP-201ENST00000487497 1089 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 TXNP6-201ENST00000510190 310 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 RNU6-150P-201ENST00000516237 95 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC004024.1-201ENST00000549244 247 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AL596327.1-201ENST00000603629 213 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 DUXAP11-201ENST00000603858 526 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AL031176.1-201ENST00000604554 466 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC099778.2-201ENST00000610904 211 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 TUSC7.1-201ENST00000610969 165 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AL355810.1-201ENST00000614629 552 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AC021755.4-201ENST00000616620 456 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 AP000676.4-201ENST00000624659 623 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 MIR7153-201ENST00000637758 57 ntBASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SMC4Q9NTJ3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 SNORD46.1-201ENST00000364139 104 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 RNU6-343P-201ENST00000364709 104 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AL357075.1-201ENST00000404107 726 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 RNA5SP107-201ENST00000411358 122 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 BEND7P1-201ENST00000422058 457 ntBASIC4.15□□□□□ -1.75
SMC4Q9NTJ3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms