Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 RNU2-25P-201ENST00000411041 191 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 FCF1P2-201ENST00000415284 583 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC012497.1-201ENST00000429392 575 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 RPL31P54-201ENST00000429803 370 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 RPL36AP6-201ENST00000435770 321 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC105272.1-201ENST00000438604 198 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 CYCSP32-201ENST00000440548 321 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AL050341.1-201ENST00000447743 313 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 RAC1P5-201ENST00000512182 576 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 RN7SKP132-201ENST00000516001 208 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 U73023.1-201ENST00000603134 700 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 AP001002.2-201ENST00000625137 386 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 BX649567.1-201ENST00000642071 1134 ntBASIC2.64□□□□□ -1.99
TREX1Q9NSU2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TREX1Q9NSU2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 MTCO1P4-201ENST00000520516 1409 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 RNU6-609P-201ENST00000365459 107 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 SNORD116-23-201ENST00000384645 92 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC092447.6-201ENST00000414578 210 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 SFR1P2-201ENST00000421841 730 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 MTCO2P1-201ENST00000424648 477 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AL645638.1-201ENST00000440519 361 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC011816.1-201ENST00000441346 546 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 MOB1AP2-201ENST00000446060 614 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 RNA5SP282-201ENST00000516355 108 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 RNU6-334P-201ENST00000517072 102 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 ARL2BPP5-201ENST00000523141 481 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC087272.1-201ENST00000523624 533 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 OR7K1P-201ENST00000546439 926 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC093519.1-201ENST00000566109 298 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC090666.1-201ENST00000578241 445 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC138761.3-201ENST00000579993 334 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC010620.2-201ENST00000600135 313 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC012669.1-201ENST00000603209 283 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AC106900.2-201ENST00000604994 317 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AL033523.1-201ENST00000605153 153 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 BX664608.1-201ENST00000610519 487 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 AL137790.1-201ENST00000634283 177 ntBASIC2.63□□□□□ -1.99
TREX1Q9NSU2 NUP58P1-201ENST00000502546 1738 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 NACA3P-201ENST00000359690 648 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AL136133.1-201ENST00000413694 376 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC091390.3-201ENST00000426478 338 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AL158053.1-201ENST00000441503 453 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 SETP11-201ENST00000473027 690 ntBASIC2.62□□□□□ -1.99
TREX1Q9NSU2 AC126182.1-201ENST00000478134 357 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms