Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.34□□□□□ -2.03
CISHQ9NSE2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CISHQ9NSE2 ZNF271P-202ENST00000465539 1970 ntBASIC2.34□□□□□ -2.04
CISHQ9NSE2 AC011460.1-201ENST00000636268 1834 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 MT-TC-201ENST00000387405 66 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 SNORA3.2-201ENST00000408221 125 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 HMGB1P11-201ENST00000413899 637 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 MTCO3P12-201ENST00000416718 547 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 BOLA3P4-201ENST00000418151 400 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 PTP4A1P7-201ENST00000423476 514 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC006548.1-201ENST00000427470 102 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AL356320.1-201ENST00000429616 163 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 MRPS33P4-201ENST00000434892 317 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC233982.1-201ENST00000451247 436 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 MRPL35P4-201ENST00000453682 566 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC004263.1-201ENST00000479327 332 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC026464.5-201ENST00000562497 722 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 GLUD1P4-201ENST00000590914 418 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AL360181.4-201ENST00000621752 134 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 LINC00216-201ENST00000623548 1126 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC064859.1-201ENST00000624741 174 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 CR381572.1-201ENST00000625098 102 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC093591.3-201ENST00000634516 308 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CISHQ9NSE2 AC090740.1-201ENST00000623193 2262 ntBASIC2.33□□□□□ -2.04
CISHQ9NSE2 ELF2P3-201ENST00000445099 1506 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 SGO1P2-201ENST00000429458 1589 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CISHQ9NSE2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 RNA5SP258-201ENST00000362750 119 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CISHQ9NSE2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 RPS3AP9-201ENST00000417027 792 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 Z98742.3-201ENST00000418637 326 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 AL035407.1-201ENST00000429211 571 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 RPL36P19-201ENST00000430744 301 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 MTCO1P57-201ENST00000432182 261 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 RPL30P14-201ENST00000482744 348 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AIG1P1-201ENST00000503376 148 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC010486.1-201ENST00000511793 424 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 AP001317.1-201ENST00000531194 960 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CISHQ9NSE2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 MIR4513-201ENST00000581077 86 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC107294.1-201ENST00000609524 467 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC013562.2-201ENST00000611632 603 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AL138880.2-201ENST00000616214 239 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC018926.3-201ENST00000618841 406 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 MIR6132-201ENST00000622083 109 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CISHQ9NSE2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.32□□□□□ -2.04
CISHQ9NSE2 AC244517.1-201ENST00000606030 2086 ntBASIC2.32□□□□□ -2.04
CISHQ9NSE2 ZNF90P1-201ENST00000480493 1951 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CISHQ9NSE2 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 DHFRP5-201ENST00000406944 564 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AF274854.1-201ENST00000413236 615 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AL135786.1-201ENST00000415892 214 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 MTCYBP34-201ENST00000439552 670 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AL590664.1-201ENST00000448065 339 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CISHQ9NSE2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 AL355810.1-201ENST00000614629 552 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
CISHQ9NSE2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.31□□□□□ -2.04
CISHQ9NSE2 AC099654.7-201ENST00000635788 2127 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms