Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 SGO1P2-201ENST00000429458 1589 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 FTLP6-201ENST00000355274 422 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 Y_RNA.62-201ENST00000362840 99 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 RNU6-461P-201ENST00000364195 107 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 RNA5SP387-201ENST00000364226 106 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 U3.12-201ENST00000364498 214 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 SNORA70.4-201ENST00000365509 134 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AP002784.2-201ENST00000397300 549 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 RNA5SP338-201ENST00000410495 85 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 RNU2-40P-201ENST00000410833 196 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 RNU6-193P-201ENST00000410977 107 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AL356320.2-201ENST00000417263 507 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC009296.1-201ENST00000443146 155 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 snoU13.22-201ENST00000459428 104 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC090515.1-201ENST00000465295 476 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC016065.2-201ENST00000514530 444 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 MIR514B-201ENST00000516774 80 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AP001804.3-201ENST00000525146 880 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AL138976.2-201ENST00000563989 694 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 MIR548Y-201ENST00000582739 110 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 AC135178.6-201ENST00000605314 398 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 DUXAP9-208ENST00000622815 614 ntBASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDC42SE2Q9NRR3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 RNU1-91P-201ENST00000364746 163 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AL031679.1-201ENST00000400616 525 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 BTF3P7-201ENST00000407097 488 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 SNORA11.4-201ENST00000408823 129 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 MTCO3P4-201ENST00000419236 787 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 PTP4A1P7-201ENST00000423476 514 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 SRIP2-201ENST00000428470 166 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AL590762.3-201ENST00000436372 640 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AL831737.1-201ENST00000441288 271 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 RNF2P1-201ENST00000442955 1010 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 SNRPGP6-201ENST00000451124 220 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 CCNHP1-201ENST00000513311 678 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 DNAJC19P3-201ENST00000594491 331 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 APOOP1-201ENST00000604695 592 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AC098657.3-201ENST00000620434 263 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AC009812.4-201ENST00000569134 1805 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AC131280.1-202ENST00000624067 4211 ntBASIC1.42□□□□□ -2.18
CDC42SE2Q9NRR3 AC004944.1-201ENST00000517807 3059 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC022336.2-201ENST00000568966 2538 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC008669.1-201ENST00000565823 2178 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC073264.1-201ENST00000411508 416 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 HSFY1P1-201ENST00000423928 1178 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 RNF19BPX-201ENST00000426224 625 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC006946.1-201ENST00000429106 328 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 USP9YP8-201ENST00000441913 500 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 GPM6BP3-201ENST00000442797 145 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 NAP1L1P3-201ENST00000462291 880 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AP003122.3-201ENST00000526316 255 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AP000867.2-201ENST00000532468 320 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 MIR3935-201ENST00000583472 104 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms