Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 SDAD1P2-201ENST00000441308 2028 ntBASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
PRDM9Q9NQV7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 RNU6-1301P-201ENST00000362724 104 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 Y_RNA.400-201ENST00000383963 111 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 RNU6-514P-201ENST00000384208 107 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AL035461.1-201ENST00000421490 332 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC016712.1-201ENST00000431088 378 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC090774.1-201ENST00000435925 246 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 SNORD2.1-201ENST00000458762 69 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC010326.1-201ENST00000462726 602 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 OR7H2P-201ENST00000513483 306 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 SNORA70.11-201ENST00000515987 138 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 SNORA70.13-201ENST00000516116 138 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AP005660.1-201ENST00000522972 293 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AL355834.1-201ENST00000556602 3965 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 AC232271.1-201ENST00000602455 2715 ntBASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRDM9Q9NQV7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AL606537.1-201ENST00000607258 2011 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 RNA5SP110-201ENST00000362638 115 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 RNU1-134P-201ENST00000362935 165 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 SNORD1C-201ENST00000363315 78 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 Y_RNA.569-201ENST00000384749 103 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 RPL35AP31-201ENST00000418340 337 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AL391219.1-201ENST00000422570 483 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 RPL12P12-201ENST00000424633 501 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 PNKDP1-201ENST00000435914 430 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 GAPDHP58-201ENST00000438477 1006 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 BTF3P6-201ENST00000448054 499 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC008945.1-201ENST00000505144 499 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AL450472.3-201ENST00000615578 367 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC073349.3-201ENST00000617616 186 ntBASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.77□□□□□ -1.49
PRDM9Q9NQV7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PRDM9Q9NQV7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRDM9Q9NQV7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms