Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
POLR1BQ9H9Y6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.75□□□□□ -1.81
POLR1BQ9H9Y6 MTND5P1-201ENST00000445440 1375 ntBASIC3.75□□□□□ -1.81
POLR1BQ9H9Y6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.75□□□□□ -1.81
POLR1BQ9H9Y6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.75□□□□□ -1.81
POLR1BQ9H9Y6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.75□□□□□ -1.81
POLR1BQ9H9Y6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 SNORA11.2-201ENST00000408318 127 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 RNU2-71P-201ENST00000411395 189 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 MTND1P21-201ENST00000412991 285 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL445669.1-201ENST00000426743 755 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL365184.2-201ENST00000431139 435 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 VDAC1P3-201ENST00000434069 851 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 HSPD1P21-201ENST00000436541 245 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 UBE2D3P4-201ENST00000441973 436 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 FAM103A2P-201ENST00000444122 354 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC010655.1-201ENST00000449336 292 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 ZNF114P1-201ENST00000453500 292 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC010468.1-201ENST00000461022 817 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL133162.1-201ENST00000463228 453 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 RPL21P104-201ENST00000464143 478 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 GTF2IP22-201ENST00000554443 182 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC091489.2-201ENST00000566263 604 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC009101.1-201ENST00000568135 242 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC105129.3-201ENST00000605455 485 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC009902.3-201ENST00000606235 2172 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC012360.2-201ENST00000609349 391 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AL590240.3-201ENST00000621416 943 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 AC007494.3-201ENST00000624660 743 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 U6.105-201ENST00000637379 88 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
POLR1BQ9H9Y6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AL133383.2-201ENST00000622958 2336 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC010733.2-201ENST00000589496 5702 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 RNU6-600P-201ENST00000362524 99 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 RNA5SP399-201ENST00000364003 117 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 MTCO1P39-201ENST00000426148 480 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 KCTD9P3-201ENST00000434597 1169 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 RPL7P36-201ENST00000444633 681 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 BMI1P1-201ENST00000445879 941 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 RPL36AP33-201ENST00000450395 310 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC098824.1-201ENST00000453565 980 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC234775.1-201ENST00000454247 670 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 VN1R17P-201ENST00000472048 1090 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 MLLT10P2-201ENST00000506434 249 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 KLHL2P1-201ENST00000508691 521 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC004062.1-201ENST00000509926 645 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC022483.1-201ENST00000514020 567 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC034268.2-201ENST00000571784 482 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 MIR3690-201ENST00000580266 75 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ZNF415P1-201ENST00000582279 1166 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC008507.1-201ENST00000587506 734 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AC026422.1-201ENST00000623961 452 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 AF127577.6-201ENST00000623352 2191 ntBASIC3.73□□□□□ -1.81
POLR1BQ9H9Y6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC011460.1-201ENST00000636268 1834 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms