Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDH23Q9H251 DHFRP5-201ENST00000406944 564 ntBASIC1.72□□□□□ -2.13
CDH23Q9H251 RPS29P1-201ENST00000465274 159 ntBASIC1.72□□□□□ -2.13
CDH23Q9H251 AP001804.3-201ENST00000525146 880 ntBASIC1.72□□□□□ -2.13
CDH23Q9H251 AC087241.2-201ENST00000535801 324 ntBASIC1.72□□□□□ -2.13
CDH23Q9H251 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CDH23Q9H251 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CDH23Q9H251 RNY1P4-201ENST00000384595 115 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 RNU6-174P-201ENST00000410406 106 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 RPL23AP7-203ENST00000449021 469 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH23Q9H251 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CDH23Q9H251 AC109446.2-201ENST00000567872 497 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.71□□□□□ -2.14
CDH23Q9H251 AC060766.3-201ENST00000591442 263 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 AL391646.1-201ENST00000603860 190 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.71□□□□□ -2.14
CDH23Q9H251 MIR6788-201ENST00000618842 66 ntBASIC1.71□□□□□ -2.14
CDH23Q9H251 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CDH23Q9H251 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CDH23Q9H251 Y_RNA.393-201ENST00000383936 102 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH23Q9H251 XKRYP4-201ENST00000414395 483 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 XKRYP5-201ENST00000449659 483 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH23Q9H251 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.7□□□□□ -2.14
CDH23Q9H251 AL353770.2-201ENST00000620024 78 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CDH23Q9H251 RNU6-1032P-201ENST00000384100 107 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 HMGB1P45-201ENST00000435986 653 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 AP000705.1-201ENST00000454567 350 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH23Q9H251 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH23Q9H251 AC104435.1-201ENST00000483483 166 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.7□□□□□ -2.14
CDH23Q9H251 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDH23Q9H251 AC008568.2-201ENST00000623862 2313 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 RNU4-51P-201ENST00000364206 140 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CDH23Q9H251 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH23Q9H251 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 MTND1P18-201ENST00000448191 573 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 SNORA70.14-201ENST00000516205 110 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.7□□□□□ -2.14
CDH23Q9H251 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.7□□□□□ -2.14
CDH23Q9H251 AL137100.2-201ENST00000555786 315 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 MIR4644-201ENST00000579929 84 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 AC006023.2-201ENST00000609916 167 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 VIS1.1-201ENST00000610517 203 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 AC009541.1-201ENST00000438279 2662 ntBASIC1.7□□□□□ -2.14
CDH23Q9H251 ZNF876P-202ENST00000398732 1485 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDH23Q9H251 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH23Q9H251 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH23Q9H251 SAR1AP4-201ENST00000429225 591 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH23Q9H251 MTCO3P13-201ENST00000577757 781 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH23Q9H251 RNU1-139P-201ENST00000391307 165 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AL021397.1-201ENST00000451806 248 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH23Q9H251 HMGN1P8-201ENST00000463578 288 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AC069528.1-202ENST00000482888 637 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AC109471.1-201ENST00000511631 612 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AP000907.2-201ENST00000530827 353 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 RN7SL793P-201ENST00000583259 296 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AC010297.1-201ENST00000623948 149 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AC092326.2-201ENST00000624772 1561 ntBASIC1.69□□□□□ -2.14
CDH23Q9H251 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CDH23Q9H251 DNAJC19P6-201ENST00000401853 280 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 OR7L1P-201ENST00000456181 380 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH23Q9H251 AC011712.1-201ENST00000588959 234 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDH23Q9H251 AC093775.1-201ENST00000624154 1868 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 AC244033.1-201ENST00000426826 870 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH23Q9H251 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH23Q9H251 RMST_6.1-201ENST00000611980 203 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 U73479.1-201ENST00000618062 168 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 HAR1A.1-201ENST00000459583 118 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 SUMO2P6-201ENST00000505273 288 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH23Q9H251 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH23Q9H251 AL121821.2-201ENST00000556081 394 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH23Q9H251 CDC27P3-201ENST00000635418 1910 ntBASIC1.68□□□□□ -2.14
CDH23Q9H251 RN7SKP123-201ENST00000410732 291 ntBASIC1.67□□□□□ -2.14
CDH23Q9H251 AL159169.1-201ENST00000421119 127 ntBASIC1.67□□□□□ -2.14
CDH23Q9H251 Y_RNA.681-201ENST00000516445 113 ntBASIC1.67□□□□□ -2.14
CDH23Q9H251 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.67□□□□□ -2.14
CDH23Q9H251 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.67□□□□□ -2.14
CDH23Q9H251 AC012150.2-201ENST00000621300 544 ntBASIC1.67□□□□□ -2.14
CDH23Q9H251 MTCO1P14-201ENST00000441695 1559 ntBASIC1.67□□□□□ -2.14
CDH23Q9H251 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CDH23Q9H251 DDX10P1-201ENST00000448545 1933 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms