Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC040926.1-201ENST00000530195 238 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC091516.1-201ENST00000549191 703 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC127381.1-201ENST00000555979 939 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AP000769.2-201ENST00000602344 396 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC009779.6-201ENST00000603972 165 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AL589674.2-201ENST00000604304 337 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 MIR6839-201ENST00000620425 113 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AC091925.2-201ENST00000625059 256 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 MIR4272-201ENST00000635924 64 ntBASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUCKS1Q9H1E3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 SMG1P4-204ENST00000523028 4131 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 SNORD62.1-201ENST00000362541 86 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 RNU5E-6P-201ENST00000365574 115 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL132765.1-201ENST00000434165 553 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 CYCSP24-201ENST00000445119 316 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 CHEK2P4-201ENST00000450340 246 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC006967.1-201ENST00000467608 589 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC026979.1-201ENST00000492525 396 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 PGAM1P13-201ENST00000507497 754 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 SNORA14.1-201ENST00000516113 141 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 FAM60DP-201ENST00000524174 632 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC090022.1-201ENST00000546569 311 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC068446.3-201ENST00000555285 382 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC006349.1-201ENST00000555526 235 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 SUB1P3-201ENST00000564581 315 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC106782.4-201ENST00000568264 210 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 MIR3133-201ENST00000583157 78 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 HMGB2P1-201ENST00000591146 634 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AL136313.1-201ENST00000624804 202 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC132825.6-201ENST00000638861 357 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 MUC2-202ENST00000613187 4845 ntBASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NUCKS1Q9H1E3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 Y_RNA.20-201ENST00000362479 113 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 Y_RNA.29-201ENST00000362570 113 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-1059P-201ENST00000363752 98 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 Y_RNA.314-201ENST00000365114 102 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-886P-201ENST00000384319 105 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RN7SKP126-201ENST00000411143 300 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AP000275.1-201ENST00000411943 390 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 HMGN1P24-201ENST00000412282 298 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RPLP0P7-201ENST00000416050 667 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RAC1P3-201ENST00000416129 580 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 NOTCH2P1-201ENST00000443481 624 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC016696.1-201ENST00000446949 318 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RNU7-59P-201ENST00000459101 61 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RPL9P32-201ENST00000464118 620 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AL136038.1-201ENST00000497246 351 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC105758.1-201ENST00000506038 399 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 SNORA25.11-201ENST00000515935 105 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms