Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 COX6CP3-201ENST00000580869 223 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 BNIP3P11-201ENST00000603878 563 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC009220.3-201ENST00000604318 586 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 U6.101-201ENST00000637707 76 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 AC099654.8-201ENST00000637757 681 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
CCSER1Q9C0I3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AP002907.1-201ENST00000606361 1430 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC107982.1-201ENST00000507171 1300 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 MIR122-201ENST00000385044 85 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AL138885.1-201ENST00000405921 675 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 FAT1P1-201ENST00000406588 507 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 RN7SKP58-201ENST00000411010 305 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC096664.2-201ENST00000411843 406 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 LUZP4P1-201ENST00000415420 344 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC019178.2-201ENST00000423595 505 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 RPL27AP8-201ENST00000424277 446 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 MTCO1P39-201ENST00000426148 480 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC091390.3-201ENST00000426478 338 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 PSMA6P3-201ENST00000428242 164 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 MUPP-201ENST00000438111 566 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC079776.3-201ENST00000450665 370 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 Z82190.1-201ENST00000454534 490 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AP004217.1-201ENST00000480579 346 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 RNA5SP341-201ENST00000516261 117 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 SNORD59.2-201ENST00000516873 68 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 RN7SKP272-201ENST00000516988 232 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC010376.1-201ENST00000522101 334 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC118942.1-201ENST00000529674 1035 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC138915.2-201ENST00000569776 97 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 MIR3912-201ENST00000577566 105 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AL606834.3-201ENST00000602615 496 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC011458.1-201ENST00000604034 617 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AL031176.1-201ENST00000604554 466 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC104763.3-201ENST00000613765 618 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 OR1S1-201ENST00000624470 978 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC010733.2-201ENST00000589496 5702 ntBASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.31□□□□□ -1.88
CCSER1Q9C0I3 MTND5P7-201ENST00000413558 1798 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 OR4G11P-202ENST00000642116 1414 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 RNU6-216P-201ENST00000363282 104 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 MIR128-1-201ENST00000384921 82 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 VN1R51P-201ENST00000411675 945 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 Z92545.1-201ENST00000411782 234 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 RPL7P30-201ENST00000420888 709 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC092427.1-201ENST00000439177 601 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 HSPE1P28-201ENST00000443139 211 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AL162389.1-201ENST00000449233 177 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 RPL36AP33-201ENST00000450395 310 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 OFD1P3Y-201ENST00000453312 783 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC011825.1-201ENST00000484967 388 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 SCARNA1-201ENST00000517138 166 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms