Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC245517.5-201ENST00000611529 162 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 PART1_1.1-201ENST00000611761 217 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC009248.2-201ENST00000619826 254 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC090617.10-201ENST00000624308 134 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 AC025031.4-201ENST00000621248 3271 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.33□□□□□ -1.72
NDC1Q9BTX1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDC1Q9BTX1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AP001273.1-201ENST00000624493 3152 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC083843.3-201ENST00000623679 2186 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 OR1S2-201ENST00000302592 978 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RNU6-1227P-201ENST00000383981 107 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.419-201ENST00000384041 102 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RNU6-278P-201ENST00000390945 109 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RN7SKP32-201ENST00000410167 303 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 ELOCP19-201ENST00000411919 318 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RPL7AP25-201ENST00000423357 805 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 MTCO3P46-201ENST00000425787 232 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 NANOGP10-201ENST00000453325 895 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AL356010.1-201ENST00000456364 102 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 snoU109.4-201ENST00000458953 143 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RPL21P126-201ENST00000470049 478 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 TMEM248P1-201ENST00000510579 951 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC112206.3-201ENST00000514578 389 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC107953.1-201ENST00000522216 297 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 SETP7-201ENST00000552169 453 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RPL21P7-201ENST00000557463 483 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AL355375.2-201ENST00000574825 175 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC140113.4-201ENST00000622087 222 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AL160413.1-201ENST00000622780 310 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AL138713.1-201ENST00000624026 2130 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AC009951.1-201ENST00000623674 2614 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.32□□□□□ -1.72
NDC1Q9BTX1 OR4G1P-203ENST00000641984 1631 ntBASIC4.32□□□□□ -1.72
NDC1Q9BTX1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL672167.1-203ENST00000641299 2975 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 RNU6-996P-201ENST00000365438 107 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.394-201ENST00000383942 103 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 SNORA32.2-201ENST00000384049 122 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 SNORD96B-201ENST00000386148 79 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 RNU6-1148P-201ENST00000410992 104 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC009237.10-201ENST00000414112 510 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL356387.2-201ENST00000422272 243 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC005534.2-201ENST00000431047 433 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 TDGF1P1-201ENST00000445734 527 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC233279.1-201ENST00000455300 423 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL049714.1-201ENST00000466686 347 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC006512.1-201ENST00000468816 291 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC103987.1-201ENST00000473394 348 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AL163973.1-201ENST00000484753 577 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NDC1Q9BTX1 RPL38P4-201ENST00000502376 214 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC020893.1-201ENST00000502452 580 ntBASIC4.31□□□□□ -1.72
NDC1Q9BTX1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms