Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMOQ99835 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SMOQ99835 AC087190.4-201ENST00000574616 8334 ntBASIC4.28□□□□□ -1.72
SMOQ99835 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
SMOQ99835 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMOQ99835 SNORA60-201ENST00000362396 134 ntBASIC4.28□□□□□ -1.72
SMOQ99835 RNU6-989P-201ENST00000362756 107 ntBASIC4.28□□□□□ -1.72
SMOQ99835 Y_RNA.381-201ENST00000365666 102 ntBASIC4.28□□□□□ -1.72
SMOQ99835 RNU6-456P-201ENST00000384493 107 ntBASIC4.28□□□□□ -1.72
SMOQ99835 AC068050.1-201ENST00000394891 380 ntBASIC4.28□□□□□ -1.72
SMOQ99835 AL603766.1-201ENST00000407763 664 ntBASIC4.28□□□□□ -1.72
SMOQ99835 RPS3AP24-201ENST00000407896 734 ntBASIC4.28□□□□□ -1.72
SMOQ99835 RNU4-6P-201ENST00000410804 122 ntBASIC4.28□□□□□ -1.72
SMOQ99835 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.28□□□□□ -1.72
SMOQ99835 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.28□□□□□ -1.72
SMOQ99835 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 UBE2V1P13-201ENST00000436983 439 ntBASIC4.28□□□□□ -1.72
SMOQ99835 RPL21P89-201ENST00000444021 467 ntBASIC4.28□□□□□ -1.72
SMOQ99835 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMOQ99835 AC006517.1-201ENST00000480485 328 ntBASIC4.28□□□□□ -1.72
SMOQ99835 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 RPL29P14-201ENST00000495837 428 ntBASIC4.28□□□□□ -1.72
SMOQ99835 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 RNA5SP337-201ENST00000517007 109 ntBASIC4.28□□□□□ -1.72
SMOQ99835 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.28□□□□□ -1.72
SMOQ99835 SETP2-201ENST00000553886 926 ntBASIC4.28□□□□□ -1.72
SMOQ99835 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.28□□□□□ -1.72
SMOQ99835 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 HMGB3P26-201ENST00000560051 582 ntBASIC4.28□□□□□ -1.72
SMOQ99835 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.28□□□□□ -1.72
SMOQ99835 AC025627.2-201ENST00000576220 160 ntBASIC4.28□□□□□ -1.72
SMOQ99835 VN1R85P-201ENST00000601587 426 ntBASIC4.28□□□□□ -1.72
SMOQ99835 AP001330.5-201ENST00000607176 411 ntBASIC4.28□□□□□ -1.72
SMOQ99835 AC008785.1-201ENST00000624475 456 ntBASIC4.28□□□□□ -1.72
SMOQ99835 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.28□□□□□ -1.72
SMOQ99835 Z82217.1-201ENST00000625157 8149 ntBASIC4.28□□□□□ -1.72
SMOQ99835 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
SMOQ99835 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMOQ99835 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMOQ99835 Z73965.1-201ENST00000623412 2297 ntBASIC4.28□□□□□ -1.72
SMOQ99835 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SMOQ99835 CASC19-280ENST00000642102 1351 ntBASIC4.27□□□□□ -1.73
SMOQ99835 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
SMOQ99835 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.27□□□□□ -1.73
SMOQ99835 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.27□□□□□ -1.73
SMOQ99835 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
SMOQ99835 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.27□□□□□ -1.73
SMOQ99835 MARK2P15-201ENST00000432204 2186 ntBASIC4.27□□□□□ -1.73
SMOQ99835 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMOQ99835 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SMOQ99835 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMOQ99835 SNORD35B-201ENST00000363660 87 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RNU1-39P-201ENST00000383897 165 ntBASIC4.27□□□□□ -1.73
SMOQ99835 Y_RNA.573-201ENST00000384763 105 ntBASIC4.27□□□□□ -1.73
SMOQ99835 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMOQ99835 RNA5SP146-201ENST00000410743 123 ntBASIC4.27□□□□□ -1.73
SMOQ99835 MTATP6P18-201ENST00000417994 673 ntBASIC4.27□□□□□ -1.73
SMOQ99835 ELOCP4-201ENST00000420090 333 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RPS12P5-201ENST00000423449 371 ntBASIC4.27□□□□□ -1.73
SMOQ99835 PSMA2P3-201ENST00000429685 675 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RPL7P54-201ENST00000438336 674 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RPS15AP9-201ENST00000439856 381 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.27□□□□□ -1.73
SMOQ99835 Z95327.1-201ENST00000446082 482 ntBASIC4.27□□□□□ -1.73
SMOQ99835 MTND5P20-201ENST00000448677 143 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.27□□□□□ -1.73
SMOQ99835 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.27□□□□□ -1.73
SMOQ99835 RPS11P1-201ENST00000451072 473 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RNU6-420P-201ENST00000458780 107 ntBASIC4.27□□□□□ -1.73
SMOQ99835 SNORD121B-201ENST00000458838 81 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.27□□□□□ -1.73
SMOQ99835 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RPS29P25-201ENST00000481709 171 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC079382.1-201ENST00000493346 557 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.27□□□□□ -1.73
SMOQ99835 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMOQ99835 STMN1P2-201ENST00000508435 439 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC117522.1-201ENST00000509821 380 ntBASIC4.27□□□□□ -1.73
SMOQ99835 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.27□□□□□ -1.73
SMOQ99835 AC021146.1-201ENST00000511202 716 ntBASIC4.27□□□□□ -1.73
SMOQ99835 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.27□□□□□ -1.73
SMOQ99835 RNU6-358P-201ENST00000516564 75 ntBASIC4.27□□□□□ -1.73
SMOQ99835 RN7SKP234-201ENST00000517173 224 ntBASIC4.27□□□□□ -1.73
SMOQ99835 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.27□□□□□ -1.73
SMOQ99835 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.27□□□□□ -1.73
SMOQ99835 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.27□□□□□ -1.73
SMOQ99835 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms