Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL133271.1-201ENST00000538229 291 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 AL121603.1-201ENST00000553815 142 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 AC009063.1-201ENST00000563342 702 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 MIR4444-1-201ENST00000581696 74 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 MIR4444-2-201ENST00000584390 74 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 DUXAP4-201ENST00000603046 613 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 XIAPP1-201ENST00000603162 600 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP88Q99567 AL161734.1-201ENST00000609720 557 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 AL355472.4-201ENST00000610233 626 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP88Q99567 PISRT1-201ENST00000626175 531 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP88Q99567 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP88Q99567 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP88Q99567 MAPK10-253ENST00000641010 4072 ntBASIC4.6□□□□□ -1.67
NUP88Q99567 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP88Q99567 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP88Q99567 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP88Q99567 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
NUP88Q99567 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUP88Q99567 Y_RNA.3-201ENST00000362331 103 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NUP88Q99567 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NUP88Q99567 SNORD3H-201ENST00000384486 214 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 U8.11-201ENST00000384699 133 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 U8.12-201ENST00000384701 133 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 RN7SKP156-201ENST00000410308 342 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 Y_RNA.619-201ENST00000410951 90 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 BX295541.1-201ENST00000417774 250 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP88Q99567 BEND7P1-201ENST00000422058 457 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC010975.2-201ENST00000427781 588 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP88Q99567 AL049734.2-201ENST00000441066 616 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP88Q99567 GAPDHP17-201ENST00000449858 1001 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 FABP3P2-201ENST00000453169 399 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 MTND1P9-201ENST00000453775 944 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
NUP88Q99567 U8.18-201ENST00000459285 133 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 TMED11P-201ENST00000479478 690 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC055855.1-201ENST00000489563 579 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP88Q99567 AC096751.1-202ENST00000502691 1067 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 RNU6-1095P-201ENST00000516148 108 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 TRMT10BP1-201ENST00000519377 943 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP88Q99567 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.59□□□□□ -1.67
NUP88Q99567 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.59□□□□□ -1.67
NUP88Q99567 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.59□□□□□ -1.67
NUP88Q99567 AC099489.2-201ENST00000574976 260 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 COX6CP3-201ENST00000580869 223 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC080078.2-201ENST00000603766 501 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AC087241.4-201ENST00000612441 480 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 AL158196.1-201ENST00000616786 434 ntBASIC4.59□□□□□ -1.67
NUP88Q99567 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
NUP88Q99567 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUP88Q99567 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NUP88Q99567 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP88Q99567 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP88Q99567 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP88Q99567 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP88Q99567 AC024560.2-201ENST00000507981 1497 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 SNORA73.2-201ENST00000364946 201 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 HSPD1P16-201ENST00000402302 394 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 RNU6-516P-201ENST00000411381 104 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC127391.1-201ENST00000411737 98 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 RAB9AP3-201ENST00000412737 573 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AF274854.1-201ENST00000413236 615 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 RPS15AP12-201ENST00000419498 388 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC244098.2-201ENST00000422068 99 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC092832.1-201ENST00000422934 400 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AL589872.1-201ENST00000426602 288 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 FTH1P1-201ENST00000437933 532 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 NOTCH2P1-201ENST00000443481 624 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 TPT1P14-201ENST00000448018 505 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP88Q99567 RAB9AP1-201ENST00000449393 573 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP88Q99567 MTCYBP1-201ENST00000454315 1119 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 MTCO3P20-201ENST00000454926 688 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 RPS3AP17-201ENST00000472594 777 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC093278.1-201ENST00000494700 600 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP88Q99567 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP88Q99567 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.58□□□□□ -1.68
NUP88Q99567 AC026801.2-201ENST00000515352 425 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 SCARNA14-201ENST00000516903 136 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 RNU2-46P-201ENST00000517038 113 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 RNU6-430P-201ENST00000517078 107 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 HMGN1P28-201ENST00000521340 364 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms