Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC009314.1-201ENST00000603871 304 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC005156.1-201ENST00000613371 573 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
IFT140Q96RY7 AL353746.1-201ENST00000566293 6881 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC233981.2-201ENST00000611524 1614 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 AC006378.2-201ENST00000623178 2476 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 MTND5P35-201ENST00000557537 1720 ntBASIC3□□□□□ -1.93
IFT140Q96RY7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
IFT140Q96RY7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
IFT140Q96RY7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
IFT140Q96RY7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
IFT140Q96RY7 RNU6-582P-201ENST00000362989 107 ntBASIC2.99□□□□□ -1.93
IFT140Q96RY7 AC009238.1-201ENST00000442165 424 ntBASIC2.99□□□□□ -1.93
IFT140Q96RY7 AC009237.6-201ENST00000446969 424 ntBASIC2.99□□□□□ -1.93
IFT140Q96RY7 SNRPFP4-201ENST00000456366 242 ntBASIC2.99□□□□□ -1.93
IFT140Q96RY7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.99□□□□□ -1.93
IFT140Q96RY7 CBX3P4-201ENST00000538909 354 ntBASIC2.99□□□□□ -1.93
IFT140Q96RY7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.99□□□□□ -1.93
IFT140Q96RY7 AC012360.2-201ENST00000609349 391 ntBASIC2.99□□□□□ -1.93
IFT140Q96RY7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.99□□□□□ -1.93
IFT140Q96RY7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
IFT140Q96RY7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
IFT140Q96RY7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
IFT140Q96RY7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.98□□□□□ -1.93
IFT140Q96RY7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.98□□□□□ -1.93
IFT140Q96RY7 AC087441.2-201ENST00000529141 262 ntBASIC2.98□□□□□ -1.93
IFT140Q96RY7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.98□□□□□ -1.93
IFT140Q96RY7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.98□□□□□ -1.93
IFT140Q96RY7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 RNU6-1263P-201ENST00000384601 106 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 BTBD10P2-201ENST00000404779 676 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 DHFRP5-201ENST00000406944 564 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 AC092754.2-201ENST00000463506 460 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 AC104435.1-201ENST00000483483 166 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 AC012170.1-201ENST00000495139 359 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 RNU2-58P-201ENST00000516403 183 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 ABI1P1-201ENST00000603375 1120 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
IFT140Q96RY7 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.97□□□□□ -1.93
IFT140Q96RY7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
IFT140Q96RY7 Y_RNA.191-201ENST00000363972 113 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
IFT140Q96RY7 RPL23AP39-201ENST00000415533 405 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 AL096701.2-201ENST00000416920 238 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.96□□□□□ -1.93
IFT140Q96RY7 AP000873.1-201ENST00000463987 400 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 AL121594.1-201ENST00000475906 575 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 FABP5P6-201ENST00000510588 409 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 AC092436.3-201ENST00000511788 257 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 MTCO1P30-201ENST00000515244 580 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 RN7SKP34-201ENST00000516142 244 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.96□□□□□ -1.93
IFT140Q96RY7 RN7SL622P-201ENST00000585292 275 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 AL133393.1-201ENST00000603277 287 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 MIR502-201ENST00000606349 86 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
IFT140Q96RY7 AC244517.1-201ENST00000606030 2086 ntBASIC2.96□□□□□ -1.93
IFT140Q96RY7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
IFT140Q96RY7 CR382285.2-201ENST00000624662 1495 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
IFT140Q96RY7 RNU6-356P-201ENST00000384140 107 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 AC099336.2-201ENST00000422457 254 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.96□□□□□ -1.94
IFT140Q96RY7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.96□□□□□ -1.94
IFT140Q96RY7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.96□□□□□ -1.94
IFT140Q96RY7 GZMAP1-201ENST00000503054 631 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.96□□□□□ -1.94
IFT140Q96RY7 AC090751.1-201ENST00000566966 267 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 AL354943.1-201ENST00000572103 781 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 MIR4278-201ENST00000636094 69 ntBASIC2.96□□□□□ -1.94
IFT140Q96RY7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
IFT140Q96RY7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
IFT140Q96RY7 HSPE1P26-201ENST00000405341 275 ntBASIC2.95□□□□□ -1.94
IFT140Q96RY7 AC073310.1-201ENST00000423226 1033 ntBASIC2.95□□□□□ -1.94
IFT140Q96RY7 RSL24D1P2-201ENST00000445584 366 ntBASIC2.95□□□□□ -1.94
IFT140Q96RY7 AC022431.1-201ENST00000450941 438 ntBASIC2.95□□□□□ -1.94
IFT140Q96RY7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.95□□□□□ -1.94
IFT140Q96RY7 MTCYBP17-201ENST00000503579 789 ntBASIC2.95□□□□□ -1.94
IFT140Q96RY7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.95□□□□□ -1.94
IFT140Q96RY7 AC011468.4-201ENST00000603942 409 ntBASIC2.95□□□□□ -1.94
IFT140Q96RY7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
IFT140Q96RY7 Z98749.2-208ENST00000381646 500 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 AL035405.1-201ENST00000400795 710 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 U3.37-201ENST00000408528 213 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 RPL7P46-201ENST00000425129 740 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 RPS7P2-201ENST00000435134 607 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 RPL34P26-201ENST00000445636 354 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 RNU1-123P-201ENST00000458950 160 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IFT140Q96RY7 AC098799.2-201ENST00000509466 868 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IFT140Q96RY7 AC103988.1-201ENST00000566382 2177 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms