Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HMGB3P15-201ENST00000507326 574 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AL035405.1-201ENST00000400795 710 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AC108078.1-201ENST00000508073 725 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AC093775.1-201ENST00000624154 1868 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AC092447.7-201ENST00000422212 1621 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 UBE2L2-201ENST00000254302 429 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 RNA5SP338-201ENST00000410495 85 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 POLHP1-201ENST00000411806 470 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AC079776.3-201ENST00000450665 370 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 RPPH1-2P-201ENST00000516688 293 ntBASIC1.52□□□□□ -2.17
CSMD1Q96PZ7 AP001148.1-201ENST00000624124 2359 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 SNORA31-201ENST00000362607 130 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC240504.1-201ENST00000395709 845 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AL138799.3-201ENST00000438968 350 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 RPL39P40-201ENST00000445481 146 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC013562.2-201ENST00000611632 603 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 SEPT7P7-201ENST00000420492 1301 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 HSPD1P16-201ENST00000402302 394 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC017078.1-201ENST00000416146 368 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC109464.2-201ENST00000510242 943 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC107294.3-201ENST00000609211 526 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC092159.4-201ENST00000624944 550 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC002546.1-201ENST00000588041 2504 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 VTRNA1-3-201ENST00000365645 89 ntBASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.51□□□□□ -2.17
CSMD1Q96PZ7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 SNORA70.7-201ENST00000384159 133 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AL513331.1-201ENST00000411908 397 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 USP9YP15-201ENST00000442391 422 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AC015720.1-201ENST00000565251 277 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AC060766.3-201ENST00000591442 263 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 BX649567.1-201ENST00000642071 1134 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AP001486.2-201ENST00000561652 5113 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 MTCYBP7-201ENST00000419540 1134 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AC023128.2-201ENST00000420880 1223 ntBASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CSMD1Q96PZ7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AIG1P1-201ENST00000503376 148 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AL359273.1-201ENST00000510918 627 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AF186190.1-201ENST00000517470 480 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC009314.1-201ENST00000603871 304 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC002487.1-201ENST00000604565 994 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC018690.1-201ENST00000608144 626 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC110774.1-201ENST00000623567 2018 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 RPL23AP7-203ENST00000449021 469 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 MTND4P23-201ENST00000447723 1363 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 SNORA26.7-201ENST00000391288 122 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 PAICSP7-201ENST00000419829 962 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC011472.4-201ENST00000615848 491 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 AC091895.1-201ENST00000624494 256 ntBASIC1.49□□□□□ -2.17
CSMD1Q96PZ7 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 DEFB109C-201ENST00000382575 264 ntBASIC1.48□□□□□ -2.17
CSMD1Q96PZ7 DEFB109B-201ENST00000382656 264 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms