Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 EIF2S2P4-201ENST00000461070 984 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.76□□□□□ -2.13
CFAP54Q96N23 CDC27P3-201ENST00000635418 1910 ntBASIC1.76□□□□□ -2.13
CFAP54Q96N23 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CFAP54Q96N23 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CFAP54Q96N23 RNU6-328P-201ENST00000390887 106 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 PAICSP7-201ENST00000419829 962 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 ATP5F1P1-201ENST00000433775 569 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC011979.1-201ENST00000472300 483 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 MIR1273G-201ENST00000577677 100 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC243773.3-201ENST00000613270 256 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 VN1R7P-201ENST00000619242 903 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC093775.1-201ENST00000624154 1868 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CFAP54Q96N23 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AL136133.1-201ENST00000413694 376 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC034222.1-201ENST00000494052 532 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 MTCYBP17-201ENST00000503579 789 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 MTATP6P3-201ENST00000581686 676 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 AC013562.2-201ENST00000611632 603 ntBASIC1.75□□□□□ -2.13
CFAP54Q96N23 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CFAP54Q96N23 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.75□□□□□ -2.13
CFAP54Q96N23 U3.37-201ENST00000408528 213 ntBASIC1.74□□□□□ -2.13
CFAP54Q96N23 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.74□□□□□ -2.13
CFAP54Q96N23 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.74□□□□□ -2.13
CFAP54Q96N23 AIG1P1-201ENST00000503376 148 ntBASIC1.74□□□□□ -2.13
CFAP54Q96N23 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.74□□□□□ -2.13
CFAP54Q96N23 OR4G11P-202ENST00000642116 1414 ntBASIC1.74□□□□□ -2.13
CFAP54Q96N23 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
CFAP54Q96N23 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CFAP54Q96N23 RNU6-1105P-201ENST00000384774 107 ntBASIC1.74□□□□□ -2.13
CFAP54Q96N23 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
CFAP54Q96N23 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.74□□□□□ -2.13
CFAP54Q96N23 NIFKP8-201ENST00000560500 874 ntBASIC1.74□□□□□ -2.13
CFAP54Q96N23 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CFAP54Q96N23 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CFAP54Q96N23 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 RNA5SP257-201ENST00000363023 116 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 SNORD88.1-201ENST00000408684 91 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 RAD23BP2-201ENST00000416003 1207 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 AL138785.1-201ENST00000425821 331 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC108078.1-201ENST00000508073 725 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC087854.1-201ENST00000519706 414 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CFAP54Q96N23 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CFAP54Q96N23 RNU4-41P-201ENST00000364426 143 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC109464.2-201ENST00000510242 943 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC008687.2-201ENST00000597865 520 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 AC010297.1-201ENST00000623948 149 ntBASIC1.73□□□□□ -2.13
CFAP54Q96N23 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.73□□□□□ -2.13
CFAP54Q96N23 MIR6073-201ENST00000352083 89 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 RNU4-51P-201ENST00000364206 140 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.72□□□□□ -2.13
CFAP54Q96N23 USP9YP10-201ENST00000454868 628 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.72□□□□□ -2.13
CFAP54Q96N23 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.72□□□□□ -2.13
CFAP54Q96N23 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CFAP54Q96N23 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CFAP54Q96N23 AC234781.2-201ENST00000426370 994 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 RPS15AP36-201ENST00000492022 382 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 AC114801.2-201ENST00000503825 781 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 AC091895.1-201ENST00000624494 256 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CFAP54Q96N23 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.72□□□□□ -2.13
CFAP54Q96N23 RNU6-1080P-201ENST00000383982 107 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.72□□□□□ -2.13
CFAP54Q96N23 AP000705.1-201ENST00000454567 350 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.72□□□□□ -2.13
CFAP54Q96N23 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CFAP54Q96N23 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
CFAP54Q96N23 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.71□□□□□ -2.13
CFAP54Q96N23 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
CFAP54Q96N23 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms