Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RNU6-74P-201ENST00000384235 107 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 ENSAP1-201ENST00000392855 326 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 MRPL42P2-201ENST00000403169 426 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL162578.1-201ENST00000406202 378 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL591848.1-201ENST00000413092 322 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 VN1R36P-201ENST00000414936 291 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 UQCRBP1-201ENST00000421129 336 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC010881.1-201ENST00000433830 235 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL451139.1-201ENST00000434718 346 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RPS26P2-201ENST00000440331 348 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC104651.2-201ENST00000447549 528 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL136380.1-201ENST00000447970 162 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RPL31P50-201ENST00000471002 296 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC068305.1-201ENST00000497406 726 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC021146.3-201ENST00000511911 260 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 COX6CP8-201ENST00000522620 226 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 HSPE1P3-201ENST00000559254 309 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 MIR3167-201ENST00000579623 85 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC017100.2-201ENST00000584628 355 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC011468.4-201ENST00000603942 409 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AC015813.4-201ENST00000610469 179 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 AL603758.1-201ENST00000618654 241 ntBASIC3.8□□□□□ -1.8
ZNF48Q96MX3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.8□□□□□ -1.8
ZNF48Q96MX3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 OR56B2P-202ENST00000641377 2453 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RPL23AP57-201ENST00000332361 466 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RNU6-730P-201ENST00000383954 104 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 MIR606-201ENST00000384851 96 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RPL32P23-201ENST00000397237 405 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 DHFRP6-201ENST00000401776 268 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RN7SKP267-201ENST00000410381 285 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 TPMTP2-201ENST00000414372 726 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 ELOCP4-201ENST00000420090 333 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RGS17P1-201ENST00000423358 553 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AL353777.1-201ENST00000425552 326 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC024082.2-201ENST00000434771 238 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RPL23AP33-201ENST00000442301 452 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RPL29P29-201ENST00000448725 423 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 PCBP2P3-201ENST00000509726 843 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC112206.3-201ENST00000514578 389 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RNA5SP401-201ENST00000515920 127 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 RN7SKP13-201ENST00000515933 244 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC104986.1-201ENST00000517978 436 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 SOD1P3-201ENST00000518682 454 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC023050.3-201ENST00000541142 333 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC084783.1-201ENST00000565846 910 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC099489.2-201ENST00000574976 260 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC069061.3-201ENST00000582254 823 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC008782.1-201ENST00000603386 430 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 BX664608.1-201ENST00000610519 487 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC008121.3-201ENST00000618726 433 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC233309.1-201ENST00000619522 751 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC009248.2-201ENST00000619826 254 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC068831.8-201ENST00000620171 435 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC009161.2-201ENST00000624626 138 ntBASIC3.79□□□□□ -1.8
ZNF48Q96MX3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF48Q96MX3 AC010149.2-201ENST00000637608 315 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms