Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC42Q96M95 RNA5SP24-201ENST00000516478 95 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC126177.3-201ENST00000551839 688 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC42Q96M95 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC006023.1-201ENST00000603944 259 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 AL033523.1-201ENST00000605153 153 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC006329.2-201ENST00000611491 394 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 MIR6817-201ENST00000615588 66 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 STMN1P1-201ENST00000617809 440 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC110079.1-202ENST00000635213 138 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 AC097714.1-201ENST00000511272 1647 ntBASIC2.46□□□□□ -2.02
CCDC42Q96M95 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC42Q96M95 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC42Q96M95 RNU6-543P-201ENST00000362576 108 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 MTND4LP20-201ENST00000402379 270 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 RNA5SP184-201ENST00000411071 108 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC096533.1-201ENST00000411645 353 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC092745.2-202ENST00000411880 369 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 COTL1P1-201ENST00000422309 375 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 TMEM167AP1-201ENST00000423409 219 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 MTCO1P39-201ENST00000426148 480 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC096632.1-201ENST00000427395 310 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AL121578.1-201ENST00000428051 892 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC42Q96M95 MRPS33P4-201ENST00000434892 317 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 CYCSP32-201ENST00000440548 321 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC004022.1-201ENST00000447766 1066 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC087808.1-201ENST00000520501 361 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 MTCO1P47-201ENST00000523889 1271 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 MIR5694-201ENST00000581190 76 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AC073968.1-201ENST00000618594 637 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 AP001002.2-201ENST00000625137 386 ntBASIC2.45□□□□□ -2.02
CCDC42Q96M95 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC42Q96M95 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC42Q96M95 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC42Q96M95 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 RNU6-441P-201ENST00000384545 106 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 MIR493-201ENST00000385254 89 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 UBE2V1P9-201ENST00000414760 368 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 AL356320.2-201ENST00000417263 507 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 USP9YP27-201ENST00000418455 438 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 NUP35P1-201ENST00000422734 947 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 NANOGP5-201ENST00000424456 877 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC42Q96M95 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 RAB11AP1-201ENST00000442978 646 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 RN7SL432P-201ENST00000484057 298 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 MRPL42P6-201ENST00000486397 371 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC234781.5-201ENST00000508429 271 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 HMGB3P3-201ENST00000510526 400 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 RPL7P20-201ENST00000520308 745 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AP000867.2-201ENST00000532468 320 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 ISCA1P3-201ENST00000577104 373 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 FAM60BP-201ENST00000578364 658 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 VN1R78P-201ENST00000597393 564 ntBASIC2.44□□□□□ -2.02
CCDC42Q96M95 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC42Q96M95 AL513185.3-201ENST00000433335 1300 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 RNU6-730P-201ENST00000383954 104 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 RNU6-444P-201ENST00000383988 108 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 MIR491-201ENST00000384877 84 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 CYCSP45-201ENST00000402289 315 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 MTND1P23-201ENST00000416931 372 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 Z75741.2-201ENST00000417272 1167 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 MORF4L1P6-201ENST00000418771 268 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms