Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MTCO3P45-201ENST00000443036 613 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC116533.1-201ENST00000459748 321 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC138Q96M89 HSPE1P6-201ENST00000479457 291 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 RPL35P6-201ENST00000490024 372 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AP001086.1-201ENST00000494882 321 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC082651.2-201ENST00000496833 166 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC010587.1-201ENST00000505809 469 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 SNORA18.6-201ENST00000516792 115 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 OR4H12P-201ENST00000556269 907 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 MIR3921-201ENST00000577308 85 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC138Q96M89 NRBF2P1-201ENST00000587407 859 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AF038458.1-201ENST00000588406 262 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC020910.2-201ENST00000603635 610 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC090425.2-201ENST00000608818 501 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC006566.1-201ENST00000608943 513 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AP000254.1-201ENST00000609934 520 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 FAM27D1-201ENST00000612308 341 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 MIR6810-201ENST00000622701 70 ntBASIC4.15□□□□□ -1.75
CCDC138Q96M89 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC138Q96M89 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC138Q96M89 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC138Q96M89 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC138Q96M89 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC138Q96M89 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC138Q96M89 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC138Q96M89 RPL32P3-201ENST00000359025 275 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 RNA5SP388-201ENST00000362584 119 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 RNA5SP509-201ENST00000364577 119 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 OR5H15-201ENST00000383696 930 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 RPL23AP32-201ENST00000395315 459 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 TXNP7-201ENST00000406296 293 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 RPL21P24-201ENST00000413752 448 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 RPL27AP8-201ENST00000424277 446 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 MTCO3P5-201ENST00000433620 714 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC009961.2-201ENST00000435771 251 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 HMGN2P16-201ENST00000456802 261 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC026979.1-201ENST00000492525 396 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AL359273.1-201ENST00000510918 627 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC093840.1-201ENST00000511599 336 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 GMPSP1-201ENST00000514075 579 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 RNU6-64P-201ENST00000517119 105 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 RNU6-840P-201ENST00000517275 65 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC100870.1-201ENST00000522035 505 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC123904.3-201ENST00000547218 814 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AL391156.1-201ENST00000554965 554 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC079089.3-201ENST00000603094 673 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC104073.3-201ENST00000610942 955 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC114781.5-201ENST00000615297 108 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 AC008013.2-202ENST00000637965 364 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 SDAD1P2-201ENST00000441308 2028 ntBASIC4.14□□□□□ -1.75
CCDC138Q96M89 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC138Q96M89 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC138Q96M89 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 OR1S2-201ENST00000302592 978 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 RNU1-132P-201ENST00000364300 164 ntBASIC4.13□□□□□ -1.75
CCDC138Q96M89 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC138Q96M89 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms