Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 MIR3670-2-201ENST00000582974 65 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 MIR3670-1-201ENST00000584160 65 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 MIR3670-3-201ENST00000584855 65 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC136443.5-201ENST00000603741 370 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC131902.3-201ENST00000611767 581 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 MIR3670-4-201ENST00000612260 65 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SPG11Q96JI7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 AL136133.1-201ENST00000413694 376 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 RPL31P2-201ENST00000413849 377 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC007560.1-201ENST00000426912 237 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC011472.4-201ENST00000615848 491 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 AL353748.2-201ENST00000622148 471 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC022513.1-201ENST00000624512 117 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SPG11Q96JI7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC007342.9-201ENST00000623877 1385 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 RAD23BP2-201ENST00000416003 1207 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 RPS6P12-201ENST00000432491 726 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC114801.2-201ENST00000503825 781 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 RNU6-250P-201ENST00000516958 103 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 OR4P1P-201ENST00000530808 1136 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC006023.2-201ENST00000609916 167 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 AC012078.1-201ENST00000405035 1646 ntBASIC1.58□□□□□ -2.16
SPG11Q96JI7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AL138785.1-201ENST00000425821 331 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 CBWD4P-201ENST00000445695 655 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 RNU6-826P-201ENST00000516827 104 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC036111.3-201ENST00000526389 112 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 VN1R7P-201ENST00000619242 903 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC010297.1-201ENST00000623948 149 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AL136164.4-201ENST00000625013 2135 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC007256.1-201ENST00000392253 2765 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC002524.1-201ENST00000411687 547 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 AL358453.1-201ENST00000422522 250 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 SDR42E1P3-201ENST00000438345 502 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 AL691517.1-201ENST00000440833 1235 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC034244.1-201ENST00000507687 207 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.57□□□□□ -2.16
SPG11Q96JI7 AC008133.2-201ENST00000624540 351 ntBASIC1.57□□□□□ -2.16
SPG11Q96JI7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
SPG11Q96JI7 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 SNORD6-201ENST00000365444 73 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 BTBD10P2-201ENST00000404779 676 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.56□□□□□ -2.16
SPG11Q96JI7 MUPP-201ENST00000438111 566 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.56□□□□□ -2.16
SPG11Q96JI7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.56□□□□□ -2.16
SPG11Q96JI7 CALM1P2-201ENST00000452941 448 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AC109486.1-201ENST00000486833 374 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AC021087.2-201ENST00000504656 1203 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.56□□□□□ -2.16
SPG11Q96JI7 OOSP1P2-201ENST00000579644 351 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 MIR5002-201ENST00000584713 97 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AC099778.2-201ENST00000610904 211 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.56□□□□□ -2.16
SPG11Q96JI7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.56□□□□□ -2.16
SPG11Q96JI7 AC025263.3-201ENST00000622965 1396 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 MIR6073-201ENST00000352083 89 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 USP9YP33-201ENST00000412220 421 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 VN1R108P-201ENST00000431580 830 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 USP9YP35-201ENST00000435696 412 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 DUXAP8-207ENST00000456786 622 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 RPS29P12-201ENST00000460178 152 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AC107393.1-201ENST00000512403 346 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 GLYCAM1-201ENST00000546596 285 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
SPG11Q96JI7 FAM106DP-201ENST00000586416 501 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms