Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC091516.1-201ENST00000549191 703 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC087883.1-201ENST00000551882 391 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AP001094.1-201ENST00000579805 193 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AL365503.1-201ENST00000605247 905 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC121334.2-201ENST00000605387 271 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC055876.5-201ENST00000605667 259 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC138649.3-201ENST00000622154 254 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC112484.5-201ENST00000624189 228 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MIR492-201ENST00000638676 116 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AP001486.2-201ENST00000561652 5113 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC009902.3-201ENST00000606235 2172 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 SNORA31-201ENST00000362607 130 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 RN7SKP226-201ENST00000364912 300 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 RNU6-629P-201ENST00000384061 103 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 RNA5SP306-201ENST00000411087 107 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 SNORD121B-201ENST00000458838 81 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC110792.1-201ENST00000491826 472 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AL139099.1-201ENST00000497398 403 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC017037.2-201ENST00000513850 890 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 OR5D17P-201ENST00000531492 978 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AL356432.3-201ENST00000568952 465 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC068790.3-201ENST00000602988 553 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 DUXAP4-201ENST00000603046 613 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AL391813.2-201ENST00000609113 322 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC083809.1-201ENST00000615051 472 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC002550.2-201ENST00000621246 394 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC012150.2-201ENST00000621300 544 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 AC066616.2-201ENST00000559334 1481 ntBASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDK5RAP3Q96JB5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 RNU6-1249P-201ENST00000363237 111 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 MIR607-201ENST00000385241 96 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 RPL21P65-201ENST00000406094 466 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 RNU4-6P-201ENST00000410804 122 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL356095.1-201ENST00000417217 199 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 USP9YP36-201ENST00000424581 829 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 DNAJC19P4-201ENST00000440115 345 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL353748.1-201ENST00000440753 474 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL049734.2-201ENST00000441066 616 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC092451.1-201ENST00000480211 153 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 RPL23AP41-201ENST00000484754 458 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 RPL31P61-201ENST00000496160 376 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AF213884.2-201ENST00000510417 903 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 NRBF2P1-201ENST00000587407 859 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC244505.7-201ENST00000599675 272 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC011451.2-201ENST00000604303 598 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL590392.1-201ENST00000604960 446 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 BX664608.1-201ENST00000610519 487 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AC092794.1-201ENST00000612734 582 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms