Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC083760.1-201ENST00000589621 670 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC010738.1-201ENST00000604970 987 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC106900.2-201ENST00000604994 317 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC106028.5-201ENST00000610332 395 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 AC080188.3-201ENST00000624842 748 ntBASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ECHDC3Q96DC8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC092447.7-201ENST00000422212 1621 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 MTCO1P23-201ENST00000415223 1526 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC016769.3-201ENST00000396562 315 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AL360182.1-201ENST00000397433 468 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 RPS4XP3-201ENST00000398541 413 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AL138827.1-201ENST00000402666 306 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AL133264.1-201ENST00000407157 562 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 RNA5SP21-201ENST00000410917 96 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 RPS15AP38-201ENST00000413110 372 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 RPL7P30-201ENST00000420888 709 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 MTCO1P48-201ENST00000448024 1096 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 COX6CP18-201ENST00000448769 222 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC026414.1-201ENST00000504046 698 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 GTF3AP2-201ENST00000557014 266 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC138761.3-201ENST00000579993 334 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC091057.2-201ENST00000602594 792 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AP003973.1-201ENST00000604639 691 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 ATP1B3P1-201ENST00000605365 821 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AP000238.1-201ENST00000608759 426 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC004696.1-201ENST00000614345 607 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ECHDC3Q96DC8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 SUGT1P1-201ENST00000379514 476 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AL136372.1-201ENST00000403060 228 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AL592148.1-201ENST00000413568 445 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 EZH2P1-201ENST00000431167 291 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 MTND4LP10-201ENST00000435146 291 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AL590664.1-201ENST00000448065 339 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 BOLA3P3-201ENST00000505182 232 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AC026801.2-201ENST00000515352 425 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 SNORA48.10-201ENST00000516965 160 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 OR4P1P-201ENST00000530808 1136 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 FAM60BP-201ENST00000578364 658 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AF131215.7-201ENST00000602443 707 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AC091946.2-201ENST00000606105 291 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AC090740.1-201ENST00000623193 2262 ntBASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.78□□□□□ -1.96
ECHDC3Q96DC8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
ECHDC3Q96DC8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 Y_RNA.110-201ENST00000363220 99 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 RAP1BP1-201ENST00000412709 553 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 BMS1P22-201ENST00000414726 313 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 LUZP4P1-201ENST00000415420 344 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AL139281.1-201ENST00000422120 335 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms