Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 U73479.1-201ENST00000618062 168 ntBASIC1.79□□□□□ -2.12
TTC28Q96AY4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TTC28Q96AY4 ZNF876P-202ENST00000398732 1485 ntBASIC1.79□□□□□ -2.12
TTC28Q96AY4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TTC28Q96AY4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TTC28Q96AY4 RNA5SP502-201ENST00000362694 119 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TTC28Q96AY4 AL390023.1-201ENST00000428836 262 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.78□□□□□ -2.12
TTC28Q96AY4 DYNLL1P5-201ENST00000467158 270 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC021087.2-201ENST00000504656 1203 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TTC28Q96AY4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC108078.1-201ENST00000508073 725 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AL359273.1-201ENST00000510918 627 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.78□□□□□ -2.12
TTC28Q96AY4 RFPL1S-203ENST00000539579 330 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 HMGB3P26-201ENST00000560051 582 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC110741.2-201ENST00000605278 268 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC009487.4-201ENST00000624969 3585 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC000367.1-201ENST00000452711 1766 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 DEFA7P-201ENST00000382676 285 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC002524.1-201ENST00000411687 547 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AMD1P1-201ENST00000457220 922 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC008126.1-201ENST00000549019 480 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 AC011492.1-201ENST00000600023 315 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 VN1R74P-201ENST00000613259 503 ntBASIC1.78□□□□□ -2.12
TTC28Q96AY4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.13
TTC28Q96AY4 AC007256.1-201ENST00000392253 2765 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TTC28Q96AY4 RNU4-51P-201ENST00000364206 140 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 RAC1P3-201ENST00000416129 580 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 EXTL2P1-201ENST00000446218 416 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 NIFKP8-201ENST00000560500 874 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 AL137072.1-201ENST00000603444 466 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 MIR98-201ENST00000606724 119 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TTC28Q96AY4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
TTC28Q96AY4 RNU1-87P-201ENST00000363727 170 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 RNA5SP139-201ENST00000364340 117 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 SRIP3-201ENST00000413200 219 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 PAICSP7-201ENST00000419829 962 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 AP000852.1-201ENST00000472460 573 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 FAM92A1P1-201ENST00000528023 890 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 PDCL2P2-201ENST00000533651 189 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC109446.2-201ENST00000567872 497 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TTC28Q96AY4 STMN1P1-201ENST00000617809 440 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TTC28Q96AY4 AC010329.2-201ENST00000595195 2737 ntBASIC1.77□□□□□ -2.13
TTC28Q96AY4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TTC28Q96AY4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.77□□□□□ -2.13
TTC28Q96AY4 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
TTC28Q96AY4 RNU1-22P-201ENST00000363334 158 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 AL121972.1-201ENST00000402023 252 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 ATP5F1P1-201ENST00000433775 569 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC012119.1-201ENST00000603184 222 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.76□□□□□ -2.13
TTC28Q96AY4 MAPK10-266ENST00000641066 6555 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 CKAP2P1-201ENST00000555477 2049 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 FAM35CP-201ENST00000554755 2470 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 RPS3AP22-201ENST00000488297 769 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.76□□□□□ -2.13
TTC28Q96AY4 GLYCAM1-201ENST00000546596 285 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC013444.2-201ENST00000603317 787 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 AC132825.8-201ENST00000640783 297 ntBASIC1.76□□□□□ -2.13
TTC28Q96AY4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TTC28Q96AY4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TTC28Q96AY4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 AL356806.1-201ENST00000422524 916 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 USP9YP8-201ENST00000441913 500 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 RPS15AP36-201ENST00000492022 382 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TTC28Q96AY4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 TEX21P-201ENST00000447107 1476 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.75□□□□□ -2.13
TTC28Q96AY4 MIR1183-201ENST00000408856 89 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 RAD23BP2-201ENST00000416003 1207 ntBASIC1.75□□□□□ -2.13
TTC28Q96AY4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TTC28Q96AY4 AIG1P1-201ENST00000503376 148 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms