Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM48Q8IWZ4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM48Q8IWZ4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
TRIM48Q8IWZ4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 SMG1P6-201ENST00000532337 2930 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC139713.2-215ENST00000641428 5037 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-989P-201ENST00000362756 107 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNA5SP443-201ENST00000363083 132 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.100-201ENST00000363141 102 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-398P-201ENST00000384143 109 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-432P-201ENST00000384196 109 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RN7SKP159-201ENST00000410657 292 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-516P-201ENST00000411381 104 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RPS12P5-201ENST00000423449 371 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RPL21P133-201ENST00000443666 476 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 PRPS1P1-201ENST00000445305 876 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC016696.1-201ENST00000446949 318 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AL031584.1-201ENST00000447169 754 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 TPT1P13-201ENST00000449760 499 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 MTND1P9-201ENST00000453775 944 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNU7-180P-201ENST00000459240 63 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC010326.1-201ENST00000462726 602 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-327P-201ENST00000516270 127 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC005868.1-201ENST00000536421 331 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AL110118.1-201ENST00000553543 400 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 FRG2DP-202ENST00000566967 323 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 MIR4716-201ENST00000579628 84 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 MIR4424-201ENST00000585257 86 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AP001836.1-201ENST00000604675 523 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 uc_338.15-201ENST00000615470 191 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC011155.2-201ENST00000623202 216 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 MTND4LP32-201ENST00000636111 270 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 U6.114-201ENST00000636407 96 ntBASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM48Q8IWZ4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-179P-201ENST00000363350 107 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RNA5SP505-201ENST00000364748 108 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.378-201ENST00000365652 113 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 SNORA24.1-201ENST00000384401 135 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 SNORA75.4-201ENST00000391278 119 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 Z98745.1-201ENST00000402553 494 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RNU2-29P-201ENST00000410423 189 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AL161631.1-201ENST00000417933 486 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AL590609.2-201ENST00000421430 368 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 ATP5HP2-201ENST00000433885 485 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RPL23AP43-201ENST00000446445 471 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 H2AFZP5-201ENST00000446960 382 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AL513533.1-201ENST00000453728 415 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RPS29P33-201ENST00000456717 146 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RPL12P20-201ENST00000475538 479 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RPS15AP36-201ENST00000492022 382 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC109635.4-202ENST00000531666 412 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 SETP7-201ENST00000552169 453 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC093249.4-201ENST00000564755 259 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 RN7SL652P-201ENST00000577769 300 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 MIR4293-201ENST00000584305 78 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms