Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-1266P-201ENST00000362794 105 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 snoU2_19.2-201ENST00000363024 80 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-740P-201ENST00000364734 105 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 MIR92A2-201ENST00000385299 75 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC138761.5-201ENST00000433967 325 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 RPL29P29-201ENST00000448725 423 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC091180.1-201ENST00000462104 372 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC008958.1-201ENST00000511047 682 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 HIGD1AP5-201ENST00000529959 259 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AL049872.1-201ENST00000556323 322 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 MRPS21P7-201ENST00000566937 238 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AL160281.1-201ENST00000605307 311 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AL591516.1-201ENST00000611326 274 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC110801.1-201ENST00000623590 212 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AL691477.1-201ENST00000624398 162 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 OR9K1P-202ENST00000641111 3217 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC116667.1-201ENST00000604855 2072 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 RNU1-76P-201ENST00000362903 159 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.122-201ENST00000363331 96 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-704P-201ENST00000364162 103 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-708P-201ENST00000384217 107 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 MIR613-201ENST00000385248 95 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 U3.29-201ENST00000391296 212 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 MRPL35P1-201ENST00000404272 572 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AL030996.1-201ENST00000411430 235 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC092809.3-201ENST00000415453 231 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AL133173.1-201ENST00000423458 397 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 RPL12P17-201ENST00000432393 498 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC053481.1-201ENST00000467217 306 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 RN7SL629P-201ENST00000489622 285 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 NDUFB4P9-201ENST00000511646 388 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 ATP5LP3-201ENST00000514223 304 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 ERHP1-201ENST00000523006 310 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AP006587.4-201ENST00000526053 529 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC004024.1-201ENST00000549244 247 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC126177.3-201ENST00000551839 688 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 HMGN2P47-201ENST00000559378 272 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 MIR4433B-201ENST00000581329 102 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AP001029.2-203ENST00000589795 4910 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 FO393422.1-201ENST00000603908 708 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC025574.2-201ENST00000615621 514 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 CU639417.4-201ENST00000623928 207 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC021753.1-201ENST00000635724 168 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 AC083843.2-201ENST00000568248 6253 ntBASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LYSMD3Q7Z3D4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms