Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL121917.1-203ENST00000605534 577 ntBASIC2.54□□□□□ -2
RFX7Q2KHR2 AC113194.1-201ENST00000606037 500 ntBASIC2.54□□□□□ -2
RFX7Q2KHR2 AC022031.1-201ENST00000585985 2593 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFX7Q2KHR2 RNA5SP37-201ENST00000365420 130 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 U8.13-201ENST00000390842 128 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 RNA5SP498-201ENST00000411342 120 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.53□□□□□ -2
RFX7Q2KHR2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.53□□□□□ -2
RFX7Q2KHR2 HMGB1P15-201ENST00000453854 435 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.53□□□□□ -2
RFX7Q2KHR2 AC010625.1-201ENST00000511296 403 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.53□□□□□ -2
RFX7Q2KHR2 RN7SKP219-201ENST00000516825 296 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.53□□□□□ -2
RFX7Q2KHR2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.53□□□□□ -2
RFX7Q2KHR2 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.53□□□□□ -2
RFX7Q2KHR2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.53□□□□□ -2
RFX7Q2KHR2 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 OR4G2P-202ENST00000641004 1759 ntBASIC2.53□□□□□ -2
RFX7Q2KHR2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
RFX7Q2KHR2 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AL356292.1-201ENST00000283110 373 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 RNU6-666P-201ENST00000363499 107 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 HNRNPDP2-201ENST00000406475 478 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 MTCO3P30-201ENST00000426425 670 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 PSMA2P3-201ENST00000429685 675 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AL157827.1-201ENST00000447622 132 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AL035407.2-201ENST00000454090 378 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AC087373.1-201ENST00000524920 491 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AC016252.1-201ENST00000609721 474 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AC103710.2-201ENST00000609912 942 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AC245517.5-201ENST00000611529 162 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 AC140725.3-201ENST00000616193 880 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 MIR6864-201ENST00000617935 70 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
RFX7Q2KHR2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX7Q2KHR2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 RNU6-532P-201ENST00000384318 107 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AL591719.1-201ENST00000444669 744 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 OSBPL9P3-201ENST00000534523 595 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 OR11H5P-201ENST00000554039 926 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AC135628.1-201ENST00000568867 534 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 HMGN2P28-201ENST00000606102 262 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 AC120053.1-201ENST00000607706 736 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 ZNF734P-201ENST00000419494 1534 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 MTND4P35-201ENST00000604257 1375 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
RFX7Q2KHR2 MTND5P29-201ENST00000458676 1807 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 HSPA8P4-201ENST00000511877 1920 ntBASIC2.51□□□□□ -2.01
RFX7Q2KHR2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 RNU6-1159P-201ENST00000362933 107 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 Y_RNA.164-201ENST00000363709 102 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 RNA5SP139-201ENST00000364340 117 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 HMGN2P30-201ENST00000423237 256 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AC073901.1-201ENST00000462471 408 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AC087879.1-201ENST00000474343 374 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 MTCYBP28-201ENST00000566728 1132 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 AL133507.1-201ENST00000605269 557 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 MIR6845-201ENST00000613182 61 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RFX7Q2KHR2 YWHAEP7-203ENST00000622054 312 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 FAM157B-203ENST00000639350 358 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 MTCO1P6-201ENST00000481192 1384 ntBASIC2.5□□□□□ -2.01
RFX7Q2KHR2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 MORF4L1P6-201ENST00000418771 268 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 CBWD4P-201ENST00000445695 655 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC025033.1-201ENST00000463883 194 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms